LOCUS BC071978 2214 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens TBC1 domain family, member 2, mRNA (cDNA clone
MGC:88675 IMAGE:5443205), complete cds.
ACCESSION BC071978
VERSION BC071978.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2214)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922166.
FEATURES Location/Qualifiers
source 1..2214
/db_xref="H-InvDB:HIT000264784"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88675 IMAGE:5443205"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2214
/gene="TBC1D2"
/gene_synonym="DKFZp761D1823"
/gene_synonym="PARIS-1"
/gene_synonym="PARIS1"
/db_xref="GeneID:55357"
CDS 346..1854
/gene="TBC1D2"
/gene_synonym="DKFZp761D1823"
/gene_synonym="PARIS-1"
/gene_synonym="PARIS1"
/codon_start=1
/product="TBC1D2 protein"
/protein_id="AAH71978.1"
/db_xref="GeneID:55357"
/translation="MPIPWTASTSPLRPDAANRDFLSQQGKIEHLKDDMEAYRTQNCF
LNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASEC
SELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLAKIQALE
SRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAGVPREHRPRVWRWLVHLRVQ
HLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAF
SWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQ
RVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGT
KVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMK
QLRQLRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA"
BASE COUNT 464 a 679 c 651 g 420 t
ORIGIN
1 cctttgggaa gctgcccgcc gagtctccga gatttgtccc tggtggtccc gcggacccct
61 cgtccctccg cagtctccgg ctggcagcga tggagggcgc tggggagaac gccccggagt
121 ccagctcctc tgcccctggg tccgaagagt ctgccaggga tccacaggtg ccgcctccgg
181 aggaagaatc gggggactgc gcccggtccc tggaggcggt ccccaagaaa ctctgtgggt
241 atttaagtaa gttcggcggc aaagggccca tccggggctg gaaatcccgc tggttcttct
301 acgacgaaag gaaatgtcag ctgtattact cgcggaccgc tcaggatgcc aatcccttgg
361 acagcatcga cctctccttt gcgccccgac gctgccaaca gggacttcct gagccagcag
421 gggaagatag agcacctgaa ggatgacatg gaagcttacc ggacccagaa ctgcttcctc
481 aactccgaga tccaccaggt cacaaagatc tggagaaagg tggctgagaa ggagaaggcc
541 cttctgacga agtgcgccta cctccaagcc agaaactgcc aggtggaaag caagtacctg
601 gccggtctga gaaggctgca ggaggccctg ggggacgaag ccagcgagtg ctcagagctg
661 ctgaggcagc ttgtccagga ggcactgcag tgggaagctg gggaggcctc atctgacagc
721 atcgagctga gccccatcag taagtatgat gagtacggct tcctgacggt gcccgactat
781 gaggtggaag acctgaagct gctggccaag atccaggcgt tggagtcacg atcccaccac
841 ctgctgggcc tcgaggctgt ggatcggccg ctgagggagc gctgggctgc cctgggcgat
901 cttgtgccct cagccgagct caagcagcta ctgcgggcag gagtaccccg tgaacaccgg
961 cctcgtgtct ggaggtggct ggtccacctc cgtgtccagc acctgcacac tccaggctgc
1021 taccaggaac tgctgagccg gggccaggcc cgcgagcacc ctgctgcccg ccagattgag
1081 ctggacctga accggacctt ccccaacaac aaacacttca cctgccccac ctccagcttc
1141 cccgacaagc tccgccgggt gctgctggcc ttctcctggc agaaccccac catcggctac
1201 tgccagggcc tgaacaggct ggcggccatt gccctgctgg tcctagagga ggaggagagc
1261 gccttctggt gcctggtggc cattgtggag accatcatgc ccgctgatta ctactgcaac
1321 acgctgacgg catcccaggt ggaccagcgg gtgctccagg acctgctctc ggagaagctg
1381 cccaggctga tggcccatct ggggcagcac cacgtggatc tctccctcgt caccttcaac
1441 tggttcctcg tggtctttgc ggacagtctc attagcaaca tcctccttcg ggtctgggat
1501 gccttcctgt acgaggggac gaaggtggtg tttcgctatg ccttggccat tttcaagtac
1561 aacgagaagg agatcttgag gctacagaat ggcctggaaa tctaccagta cctgcgcttc
1621 ttcaccaaga ccatctccaa cagccggaag ctgatgaaca tcgccttcaa tgacatgaac
1681 cccttccgca tgaaacagct gcggcagctg cgcatggtcc accgggagcg gctggaggct
1741 gagctgcggg agctggagca gcttaaggca gagtacctgg agaggcgggc atcccggcgc
1801 agagctgtgt ccgagggctg tgccagcgag gacgaggtgg agggggaagc ctgacttggc
1861 cacctcccct ccccacagcc ttcctcaccc ttggctggca gacccactgg aggtcaggca
1921 cggaccagtg gcccagccct gggtgtccca tcaccatgtg accttggaca tgtcccttcc
1981 cctctctggc cctcagtttc cccactggga cattgtgtgc tgcaaagcca ttggttgggc
2041 tacttcttca taggcactta cttacccagg gatgccaccc tttcgtcacc tcttccacag
2101 agcactttgg catgtaaaca agcaagagca ctgcctctat agggtaacct ggaacattct
2161 ctaggttata tcaatataaa acaatgtaaa tggtggaaaa aaaaaaaaaa aaaa
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