LOCUS BC071953 2735 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromosome 9 open reading frame 82, mRNA (cDNA clone MGC:88643 IMAGE:5431506), complete cds. ACCESSION BC071953 VERSION BC071953.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2735) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2735) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: f Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48976053. FEATURES Location/Qualifiers source 1..2735 /db_xref="H-InvDB:HIT000264760" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88643 IMAGE:5431506" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2735 /gene="C9orf82" /gene_synonym="FLJ13657" /gene_synonym="RP11-337A23.1" /db_xref="GeneID:79886" /db_xref="HGNC:HGNC:25834" CDS 13..1098 /gene="C9orf82" /gene_synonym="FLJ13657" /gene_synonym="RP11-337A23.1" /codon_start=1 /product="chromosome 9 open reading frame 82" /protein_id="AAH71953.1" /db_xref="GeneID:79886" /db_xref="HGNC:HGNC:25834" /translation="MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCG SAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQE TKYILPTLEKELFLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQ KMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSD LVSQQDICIDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAA PEAPENTVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQ QLELLELEMRARAIKALMKAGDIKKPA" BASE COUNT 892 a 434 c 561 g 848 t ORIGIN 1 agcagaggga tcatgacggg gaaaaagtcc tcccgggaga aacggcgcaa acgtagcagt 61 caggaggcgg ccgcagcgct cgcggccccg gacatcgtac ccgcgttggc cagcggcagc 121 agtggaagca ctagcggctg cgggagcgcc gggggctgcg ggagcgtcag ctgctgtggg 181 aacgccaatt ttagtggaag tgtcaccggc ggtgggagcg gcggcagctg ttggggcggg 241 agcagcgtgg agcgcagcga gcgccggaag cggaggagta ccgactcttc cagcgtctcg 301 ggctccttgc agcaggaaac taaatatatt ttgccaactt tggaaaaaga attattcttg 361 gcagagcaca gtgaccttga agaaggtgga ctggacctga ctgtgtcatt gaaaccagtt 421 agtttctata tatcagacaa aaaagaaatg cttcagcagt gcttctgtat tataggagag 481 aaaaagttac agaagatgct tcctgatgtg ttaaagaact gttcaataga agaaattaaa 541 aaactatgcc aggaacagtt agagctcctg tctgaaaaaa aaattttgaa gattcttgag 601 ggtgacaatg gaatggactc tgatatggaa gaggaagcag atgatggttc taagatggga 661 tctgatttag tcagtcagca agacatctgt atagattctg cttcatccgt gagagagaat 721 aagcaacctg aaggtttgga attaaaacaa ggaaaagggg aagatagtga tgtactcagt 781 ataaatgcag atgcttatga cagcgacata gaaggcccat gcaacgaaga agcagctgct 841 cccgaggcac cagaaaatac agtccaaagt gaagctggtc agataaatga cctggagaaa 901 gacattgaga aaagtgtgaa tgagattcta ggactggcag agtctagccc aaacgaaccc 961 aaagcagcca ccctggctgt tcctccacca gaagatgttc aaccttctgc acagcaactg 1021 gagctgctag aacttgagat gagggcaaga gcgattaaag ccctaatgaa agctggtgat 1081 ataaaaaagc cagcctaggt atttaacttg attttgaatt ttaggtatgt ttgaacaaag 1141 ccacatcatt taattttgta tctaaaattt atttggggtc ttatatgtta tttctcatgt 1201 aacccttatt aggactcatt ttagccctaa attacctgtg gctgtttctt tttatttttt 1261 tgactacttt tatattataa atgtgtgtta ctgtcttatg aattcatggc aatatagttg 1321 gatagcctgg atactttgtt agatgagtat ttagctgtgt ctgcaaatct taaaagccat 1381 tagcaaagag tcgtggtatt tttttcttta tttttaaatg tttgggcacc aaacctaaaa 1441 gcaaaagatt gacgaagcat gtttctctta aggctacttg tattttacaa tacaatatta 1501 aattatttaa tttgagaaat ttagttttgc ttatatgcac tttttaaata tatactattt 1561 tgaagattcc ttatgtaaat gcaaatttcc tagttaaaac cgaataacag agatctgaaa 1621 tgactgagaa aaactttttt attaaaggaa ggaattaatt taaggcaatt tttaactatg 1681 tagaactaat tgcccatgtt taattatagc agacacgcca ttctaacagg tatttgatac 1741 cattggatgc attattctag gttttttctt taataaaaat ggaacaagtt ttcatttaca 1801 ttccaagctg tcaggaaatg aagaatattt tattatctag gattttatct gatgtagttg 1861 cttaaagatc tgatgtgcta taattccatg aatcagaaat aataaaatgc tatcattctg 1921 gatctgaaga cttttgatac tttttcaaaa gcaaaattaa tttcaggaac ctttgataag 1981 ttgttgttat aattaatcta attttgtata gtttttgtaa ataaattacc atccttccac 2041 aattagggat gcttttatcc ccccatcact aattgcagtt gtttgatacc aaaataaatt 2101 tacgtagaga tccttaactt aaaataaatt aattttttca aaaaacataa atctggaact 2161 gttgtttcta tatttgataa caaatacagt atattttatt tataagccat ggtctactga 2221 tactgtatga ggactttcct tatatataaa agttgcaggg attgtgtttt attagctgct 2281 ttaattatgt taattttaga gagtttttaa atggaaatag aggacattta tgaaacgctg 2341 gaattgcagt tacaaattct ttttgttgtt gttgttcctg aacatgcctt ggaataattc 2401 taccattttt tccccctcca taaatctttc taataaagca tagaaaaagc ctatatgatt 2461 ttaaatgctt ctcttaagct ggtaaacaga tttgagttat gagttcattg ttattgcttc 2521 aagatgaaaa gacagtgata taatttttct atttcaactt aaaagtaata gttaatatgc 2581 taaagtagta cagaataaac tttattgctg cttactaact acaaaatact gtagatggca 2641 tctgtatgat taaacatata aagtaaaaca ggtctgaggg ctttgtagat gattaaagtc 2701 tccaccttca tgaaaaaaaa aaaaaaaaaa aaaaa //