LOCUS BC071947 2255 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SRY (sex determining region Y)-box 7, mRNA (cDNA clone
MGC:88634 IMAGE:6459570), complete cds.
ACCESSION BC071947
VERSION BC071947.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30581119.
FEATURES Location/Qualifiers
source 1..2255
/db_xref="H-InvDB:HIT000264754"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88634 IMAGE:6459570"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2255
/gene="SOX7"
/gene_synonym="MGC10895"
/db_xref="GeneID:83595"
/db_xref="HGNC:HGNC:18196"
CDS 68..1234
/gene="SOX7"
/gene_synonym="MGC10895"
/codon_start=1
/product="SRY (sex determining region Y)-box 7"
/protein_id="AAH71947.1"
/db_xref="GeneID:83595"
/db_xref="HGNC:HGNC:18196"
/translation="MASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESR
IRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLR
LQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKE
DRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQT
FFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPG
CPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQ
YLNTPGHPDSATGAMALSGHVPVSQVTPTGPTETSLISVLADATATYYNSYSVS"
BASE COUNT 491 a 710 c 606 g 448 t
ORIGIN
1 ccgacccgtg cgagggccag gtccgcgcct gccccgccag gcgaagcgag gcgacccgcg
61 tgcggccatg gcttcgctgc tgggagccta cccttggccc gagggtctcg agtgcccggc
121 cctggacgcc gagctgtcgg atggacaatc gccgccggcc gtcccccggc ccccggggga
181 caagggctcc gagagccgta tccggcggcc catgaacgcc ttcatggttt gggccaagga
241 cgagaggaaa cggctggcag tgcagaaccc ggacctgcac aacgccgagc tcagcaagat
301 gctgggaaag tcgtggaagg cgctgacgct gtcccagaag aggccgtacg tggacgaggc
361 ggagcggctg cgcctgcagc acatgcagga ctaccccaac tacaagtacc ggccgcgcag
421 gaagaagcag gccaagcggc tgtgcaagcg cgtggacccg ggcttccttc tgagctccct
481 ctcccgggac cagaacgccc tgccggagaa gagaagcggc agccgggggg cgctggggga
541 gaaggaggac aggggtgagt actcccccgg cactgccctg cccagcctcc ggggctgcta
601 ccacgagggg ccggctggtg gtggcggcgg cggcaccccg agcagtgtgg acacgtaccc
661 gtacgggctg cccacacctc ctgaaatgtc tcccctggac gtgctggagc cggagcagac
721 cttcttctcc tccccctgcc aggaggagca tggccatccc cgccgcatcc cccacctgcc
781 agggcacccg tactcaccgg agtacgcccc aagccctctc cactgtagcc accccctggg
841 ctccctggcc cttggccagt cccccggcgt ctccatgatg tcccctgtac ccggctgtcc
901 cccatctcct gcctattact ccccggccac ctaccaccca ctccactcca acctccaagc
961 ccacctgggc cagctctccc cgcctcctga gcaccctggc ttcgacgccc tggatcaact
1021 gagccaggtg gaactcctgg gggacatgga tcgcaatgaa ttcgaccagt atttgaacac
1081 tcctggccac ccagactccg ccacaggggc catggccctc agtgggcatg ttccggtctc
1141 ccaggtgaca ccaacgggtc ccacagagac cagcctcatc tccgtcctgg ctgatgccac
1201 ggccacgtac tacaacagct acagtgtgtc atagagctgg aggcgccccg tccggtcagc
1261 cctcgcgccc tctccttcct gtgccttgag tggcagagga gccgtccagc cacaccagct
1321 ttcctcccac cgctcagggc agggaggtct gaactgcggc cccagagcct ttggcctaag
1381 ctggactctc cttatccgag tgccgcctct atccccttcc ccacgttcca gcccctgcag
1441 cccacatttt aagtatattc cttcaagtga gttttcctcc agcccctgag agttgctgtc
1501 tcccagtgga atgttcactg acgtcttttc ttggtagcca tcatcgaaac taatgggggg
1561 acagacttga tagccaaggt cccttctggt ccagttttct gatttagggt tctctcaaga
1621 ttaataaagg aagatgggga aatttgactc attaatgagc tcgctaacct acgatctggt
1681 gataattttg tgtgcacagc ccaaggacca cgaggctttc tgcactttct gcaccccctt
1741 ccaaagtgac cacaaaattt caaagggact catacaattt gagaaaaaac agtcaacctg
1801 atttgagaaa ttaaccagta tggctaacta tatcacagaa aatgggattg agttaaaact
1861 attttatttt aaatatacat tttaaagcag ttcttttttt ttgttaattt gtttattata
1921 cacacacttc aagagaatat gcacagtcta ggccgggcac ggtggctcac gcctgtaatc
1981 ccagcacttt gggaggccga ggcatgtgga tcacctgagg tcaggagttt gagaccagcc
2041 tagacaacat ggtgaaacct tgtctctatg aaaaatacaa aatttgctgg gagtggtggt
2101 gcatgcctgt aatcccagct acttggaagg ctgaggcagg agaatgtctt gaacctagga
2161 ggtggaggtt gcagtgagct gagattgcac cattgcactc cagcctgtgc aacaagagtg
2221 aaactccatt tcaagaaaaa aaaaaaaaaa aaaaa
//