LOCUS BC071945 1372 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA
clone MGC:88632 IMAGE:5475712), complete cds.
ACCESSION BC071945
VERSION BC071945.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1372)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504444.
FEATURES Location/Qualifiers
source 1..1372
/db_xref="H-InvDB:HIT000264752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88632 IMAGE:5475712"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1372
/gene="HNRPA1"
/gene_synonym="HNRNPA1"
/db_xref="GeneID:3178"
/db_xref="HGNC:HGNC:5031"
/db_xref="MIM:164017"
CDS 51..1013
/gene="HNRPA1"
/gene_synonym="HNRNPA1"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein A1"
/protein_id="AAH71945.1"
/db_xref="GeneID:3178"
/db_xref="HGNC:HGNC:5031"
/db_xref="MIM:164017"
/translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV
VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHL
TVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD
KIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGR
GGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPM
KGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF"
BASE COUNT 412 a 233 c 384 g 343 t
ORIGIN
1 gtggacgccg ccgaagaagc atcgttaaag tctctcttca ccctgccgtc atgtctaagt
61 cagagtctcc taaagagccc gaacagctga ggaagctctt cattggaggg ttgagctttg
121 aaacaactga tgagagcctg aggagccatt ttgagcaatg gggaacgctc acggactgtg
181 tggtaatgag agatccaaac accaagcgct ccaggggctt tgggtttgtc acatatgcca
241 ctgtggagga ggtggatgca gctatgaatg caaggccaca caaggtggat ggaagagttg
301 tggaaccaaa gagagctgtc tccagagaag attctcaaag accaggtgcc cacttaactg
361 tgaaaaagat atttgttggt ggcattaaag aagacactga agaacatcac ctaagagatt
421 attttgaaca gtttggaaaa attgaagtga ttgaaatcat gactgaccga ggcagtggca
481 agaaaagggg ctttgccttt gtaacctttg acgaccatga ctccgtggat aagattgtca
541 ttcagaaata ccatactgtg aatggccaca actgtgaagt tagaaaagcc ctgtcaaagc
601 aagagatggc tagtgcttca tccagccaaa gaggtcgaag tggttctgga aactttggtg
661 gtggtcgtgg aggtggtttc ggtgggaatg acaacttcgg tcgtggagga aacttcagtg
721 gtcgtggtgg ctttggtggc agccgtggtg gtggtggata tggtggcagt ggggatggct
781 ataatggatt tggtaatgat ggaagcaatt ttggaggtgg tggaagctac aatgattttg
841 ggaattacaa caatcagtct tcaaattttg gacccatgaa gggaggaaat tttggaggca
901 gaagctctgg cccctatggc ggtggaggcc aatactttgc aaaaccacga aaccaaggtg
961 gctatggcgg ttccagcagc agcagtagct atggcagtgg cagaagattt taattaggaa
1021 acaaagctta gcaggagagg agagccagag aagtgacagg gaagctacag gttacaacag
1081 atttgtgaac tcagccaagc acagtggtgg cagggcctag ctgctacaaa gaagacatgt
1141 tttagacaaa tactcatgtg tatgggcaaa aaactcgagg actgtatttg tgactaattg
1201 tataacaggt tattttagtt tctgttctgt ggaaagtgta aagcattcca acaaagggtt
1261 ttaatgtaga tttttttttt tgcaccccat gctgttgatt gctaaatgta acagtctgat
1321 cgtgacgctg aataaatgtc ttttttttaa aaaaaaaaaa aaaaaaaaaa aa
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