LOCUS BC071906 2239 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens keratin 5, mRNA (cDNA clone MGC:88585 IMAGE:6106996), complete cds. ACCESSION BC071906 VERSION BC071906.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2239) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2239) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 17318577. FEATURES Location/Qualifiers source 1..2239 /db_xref="H-InvDB:HIT000264717" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88585 IMAGE:6106996" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2239 /gene="KRT5" /gene_synonym="CK5" /gene_synonym="DDD" /gene_synonym="K5" /gene_synonym="KRT5A" /db_xref="GeneID:3852" /db_xref="HGNC:HGNC:6442" /db_xref="MIM:148040" CDS 83..1855 /gene="KRT5" /gene_synonym="CK5" /gene_synonym="DDD" /gene_synonym="K5" /gene_synonym="KRT5A" /codon_start=1 /product="keratin 5" /protein_id="AAH71906.1" /db_xref="GeneID:3852" /db_xref="HGNC:HGNC:6442" /db_xref="MIM:148040" /translation="MSRQSSVSFRSGGSRSFSTASAITPSVSRTSFTSVSRSGGGGGG GFGRVSLAGACGVGGYGSRSLYNLGGSKRISISTSGGSFRNRFGAGAGGGYGFGGGAG SGFGFGGGAGGGFGLGGGAGFGGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPS IQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPL FEQYINNLRRQLDSIVGERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLK KDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRNLD LDSIIAEVKAQYEEIANRSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRM IQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLL REYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNISVVTSSVSSGYGSGSGY GGGLGGGLGGGLGGGLAGGGSGSYYSSSSGGVGLSGGLSVGGSGFSASSGRGLGVGFG SGGGSSSSVKFVSTTSSSRKSFKS" BASE COUNT 507 a 593 c 672 g 467 t ORIGIN 1 gcgtcctgct gagctctgtt ctctccagca cctcccaacc cactagtgcc tggttctctt 61 gctccaccag gaacaagcca ccatgtctcg ccagtcaagt gtgtccttcc ggagcggggg 121 cagtcgtagc ttcagcaccg cctctgccat caccccgtct gtctcccgca ccagcttcac 181 ctccgtgtcc cggtccgggg gtggcggtgg tggtggcttc ggcagggtca gccttgcggg 241 tgcttgtgga gtgggtggct atggcagccg gagcctctac aacctggggg gctccaagag 301 gatatccatc agcactagtg gtggcagctt caggaaccgg tttggtgctg gtgctggagg 361 cggctatggc tttggaggtg gtgccggtag tggatttggt ttcggcggtg gagctggtgg 421 tggctttggg ctcggtggcg gagctggctt tggaggtggc ttcggtggcc ctggctttcc 481 tgtctgccct cctggaggta tccaagaggt cactgtcaac cagagtctcc tgactcccct 541 caacctgcaa atcgacccca gcatccagag ggtgaggacc gaggagcgcg agcagatcaa 601 gaccctcaac aataagtttg cctccttcat cgacaaggtg cggttcctgg agcagcagaa 661 caaggttctg gacaccaagt ggaccctgct gcaggagcag ggcaccaaga ccgtgaggca 721 gaacctggag ccgttgttcg agcagtacat caacaacctc aggaggcagc tggacagcat 781 cgtgggggaa cggggccgcc tggactcaga gctaagaaac atgcaggacc tggtggaaga 841 cttcaagaac aagtatgagg atgaaatcaa caagcgtacc actgctgaga atgagtttgt 901 gatgctgaag aaggatgtag atgctgccta catgaacaag gtggagctgg aggccaaggt 961 tgatgcactg atggatgaga ttaacttcat gaagatgttc tttgatgcgg agctgtccca 1021 gatgcagacg catgtctctg acacctcagt ggtcctctcc atggacaaca accgcaacct 1081 ggacctggat agcatcatcg ctgaggtcaa ggcccagtat gaggagattg ccaaccgcag 1141 ccggaccgaa gccgagtcct ggtatcagac caagtatgag gagctgcagc agacagctgg 1201 ccggcatggc gatgacctcc gcaacaccaa gcatgagatc tctgagatga accggatgat 1261 ccagaggctg agagccgaga ttgacaatgt caagaaacag tgcgccaatc tgcagaacgc 1321 cattgcggat gccgagcagc gtggggagct ggccctcaag gatgccagga acaagctggc 1381 cgagctggag gaggccctgc agaaggccaa gcaggacatg gcccggctgc tgcgtgagta 1441 ccaggagctc atgaacacca agctggccct ggacgtggag atcgccactt accgcaagct 1501 gctggagggc gaggaatgca gactcagtgg agaaggagtt ggaccagtca acatctctgt 1561 tgtcacaagc agtgtttcct ctggatatgg cagtggcagt ggctatggcg gtggcctcgg 1621 tggaggtctt ggcggcggcc tcggtggagg tcttgccgga ggtggcagtg gaagctacta 1681 ctccagcagc agtgggggtg tcggcctaag tggtgggctc agtgtggggg gctctggctt 1741 cagtgcaagc agtggccgag ggctgggggt gggctttggc agtggcgggg gtagcagctc 1801 cagcgtcaaa tttgtctcca ccacctcctc ctcccggaag agcttcaaga gctaagaacc 1861 tgctgcaagt cactgccttc caagtgcagc aacccagccc atggagattg cctcttctag 1921 gcagttgctc aagccatgtt ttatcctttt ctggagagta gtctagacca agccaattgc 1981 agaaccacat tctttggttc ccaggagagc cccattccca gcccctggtc tcccgtgccg 2041 cagttctata ttctgcttca aatcagcctt caggtttccc acagcatggc ccctgctgac 2101 acgagaatcc aaagttttcc caaatctaaa tcatcaaaac agaatcccca ccccaatccc 2161 aaattttgtt ttggttctaa ctacctccag aatgtgttca ataaaatgct tttataatat 2221 aaaaaaaaaa aaaaaaaaa //