LOCUS BC071872 740 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:88545 IMAGE:6284088), complete cds. ACCESSION BC071872 VERSION BC071872.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 740) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 740) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CGAP (Stanford) cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: k Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48976058. FEATURES Location/Qualifiers source 1..740 /db_xref="H-InvDB:HIT000264685" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88545 IMAGE:6284088" /tissue_type="Liver, hepatocellular carcinoma" /clone_lib="NIH_MGC_100" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..740 /gene="PRAP1" /gene_synonym="PRO1195" /gene_synonym="RP11-122K13.6" /gene_synonym="UPA" /db_xref="GeneID:118471" /db_xref="HGNC:HGNC:23304" /db_xref="MIM:609776" CDS 12..467 /gene="PRAP1" /gene_synonym="PRO1195" /gene_synonym="RP11-122K13.6" /gene_synonym="UPA" /codon_start=1 /product="proline-rich acidic protein 1" /protein_id="AAH71872.1" /db_xref="GeneID:118471" /db_xref="HGNC:HGNC:23304" /db_xref="MIM:609776" /translation="MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKA WGARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGRV LSPEPDHDSLYHPPPEEDQGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ" BASE COUNT 190 a 231 c 214 g 105 t ORIGIN 1 ggaccccaga catgaggagg ctcctcctgg tcaccagcct ggtggttgtg ctgctgtggg 61 aggcaggtgc agtcccagca cccaaggtcc ctatcaagat gcaagtcaaa cactggccct 121 cagagcagga cccagagaag gcctggggcg cccgtgtggt ggagcctccg gagaaggacg 181 accagctggt ggtgctgttc cctgtccaga agccgaaact cttgaccacc gaggagaagc 241 cacgaggtca gggcaggggc cccatccttc caggcaccaa ggcctggatg gagaccgagg 301 acaccctggg ccgtgtcctg agtcccgagc ccgaccatga cagcctgtac caccctccgc 361 ctgaggagga ccagggcgag gagaggcccc ggttgtgggt gatgccaaat caccaggtgc 421 tcctgggacc ggaggaagac caagaccaca tctaccaccc ccagtagggc tccaggggcc 481 atcactgccc ccgccctgtc ccaaggccca ggctgttggg actgggaccc tccctaccct 541 gccccagcta gacaaataaa ccccagcagg ccgggcgcgg tggctcacct ctgtaatccc 601 agcactttta gaggccgagg caggcggatc acctgaaatc aggagttcca gaccagcctg 661 ggcaacatgg tgaaaccccg tctctactaa aaatacaaaa attagccggg aaaaaaaaaa 721 aaaaaaaaaa aaaaaaaaaa //