LOCUS BC071868 2705 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S.
cerevisiae), mRNA (cDNA clone IMAGE:6278263), partial cds.
ACCESSION BC071868
VERSION BC071868.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2705)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2705)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: k Column: 2.
FEATURES Location/Qualifiers
source 1..2705
/db_xref="H-InvDB:HIT000264681"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6278263"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2705
/gene="RRN3"
/gene_synonym="DKFZp566E104"
/gene_synonym="TIFIA"
/db_xref="GeneID:54700"
/db_xref="HGNC:HGNC:30346"
/db_xref="MIM:605121"
CDS <1..1293
/gene="RRN3"
/gene_synonym="DKFZp566E104"
/gene_synonym="TIFIA"
/codon_start=1
/product="RRN3 protein"
/protein_id="AAH71868.1"
/db_xref="GeneID:54700"
/db_xref="HGNC:HGNC:30346"
/db_xref="MIM:605121"
/translation="LECYVHNLLRISVYFPTLRHEILELIIEKLLKLDVNASRQGIED
AEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHPVAERLDILMSLVLS
YMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAEA
FLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIYLNN
QDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMS
QLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNP
LDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQEFKKPMKKDIVEDEDDDFLKGEV
PQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL"
BASE COUNT 758 a 510 c 605 g 832 t
ORIGIN
1 ctggaatgtt acgttcataa cttactaagg attagtgtat attttccaac cttgaggcat
61 gaaattctgg agcttattat tgaaaaacta ctcaagttgg atgtgaatgc atcccggcag
121 ggtattgaag atgctgaaga aacagcaact caaacttgtg gtgggacaga ttccacggaa
181 ggattgttta atatggatga agatgaagaa actgaacatg aaacaaaggc tggtcctgaa
241 cggctcgacc agatggtgca tcctgtagcc gagcgcctgg acatcctgat gtctttggtt
301 ttgtcctaca tgaaggatgt ctgctatgta gatggtaagg ttgataacgg caaaacaaag
361 gatctatatc gcgacctgat aaacatcttt gacaaactcc tgttgcccac ccatgcctcc
421 tgccatgtac agtttttcat gttttacctc tgtagtttca aattgggatt cgcagaggca
481 tttttggaac atctctggaa aaaattgcag gacccaagta atcctgccat catcaggcag
541 gctgctggaa attatattgg aagctttttg gcaagagcta aatttattcc tcttattact
601 gtaaaatcat gcctagatct tttggttaac tggctgcaca tataccttaa taaccaggat
661 tcgggaacaa aggcattctg cgatgttgct ctccatggac cattttactc agcctgccaa
721 gctgtgttct acacctttgt ttttagacac aagcagcttt tgagcggaaa cctgaaagaa
781 ggtttgcagt atcttcagag tctgaatttt gagcggatag tgatgagcca gctaaatccc
841 ctgaagattt gcctgccctc agtggttaac ttttttgctg caatcacaaa taagtaccag
901 ctcgtcttct gctacaccat cattgagagg aacaatcgcc agatgctgcc agtcattagg
961 agtaccgctg gaggagactc agtgcagatc tgcacaaacc cgctggacac cttcttcccc
1021 tttgatccct gtgtgctgaa gaggtcaaag aaattcattg atcctattta tcaggtgtgg
1081 gaagacatga gtgctgaaga gctacaggag ttcaagaaac ccatgaaaaa ggacatagtg
1141 gaagatgaag atgatgactt tctgaaaggc gaagtgcccc agaatgatac cgtgattggg
1201 atcacaccaa gctcctttga cacgcatttc cgaagtcctt caagtagtgt gggctcccca
1261 cccgtgttgt acatgcaacc cagtcccctc tgacggcaga aatttgtgac tgagatgtga
1321 catttgggat tccccatcac ttgtcatgcc ctcagcaccc agcttgtgcc attgggcatt
1381 gatggcattg aactagagcg agtgcctgcc tcggctgtgg cacttccagg ttcgactgaa
1441 tcaagcatct gaagactggg tttttttgtt gttgttgttc cccttataga caaaatgaag
1501 actatcatgt gcaatctttt acagtggggt tgatgataca tttggaagga tttgcttgtt
1561 taatatgtac attttttgtg ttaacagctt tttgacacaa ttactgggta atttctaata
1621 taggcagcag actgttttac gggttgctgt tttaacatgg gtttttgtca gatccatggt
1681 cttaggactt gactgatgag ctttcagtga agaatcctct aagataaaac ttctatttaa
1741 agactttaac tagaaagtgt ttattttggc tacattgttc accttctgct gtattggtat
1801 ttgtctgttg ggatttcaag ggagtgtaga gaagacagaa ggaaagctga gagctggccc
1861 gacatggtct gggacacaga gttggagctg gcactgaaga tctccaggga cttcagagac
1921 caataaaagc ccatagggaa gagagagagg atatagggaa acagaatcag atgtgtaata
1981 tacttggcac agcgaaaaaa tggatttaaa agacaaaaat ggaggtccag gtagatgtaa
2041 ttcacacaga ctgaaagtga gttcgggctt gtgtaaaaca catgagattg gatttgaccc
2101 cttggctctc aagtgtcccc ttagatctag aactgctcct tggtggccat tagatcgagt
2161 cagttttgat ctgcatcact tagttattgg gaatttcttt gttggaaaca ggaaaatttt
2221 tttagattat ttggtgtacg gttttgctca caacaatagg tggaagttgc tagtgcagtc
2281 ttggtctgat ggctgtgtgc atcgcacatt cggcttggtg aaatccttct ctaaagcctc
2341 tttttgtatt tttataacta aacagaggaa gtcttcagaa gacctcgctt taaaacaaat
2401 ttgtgcaaac actgctagag tcattttgaa gctcaagcat tttcactttg tttcttacat
2461 gtgtactttt ttgtttactt gtgaaaatgg ccatctttaa gcatatttat tttctgccac
2521 tttatttaaa ggcaagcaat attttcttga tcataaatat tttgtaatga aatacttcct
2581 cttttccagg gctttgtatg cacttgtata attacattga tggcaatgta gagtttgaat
2641 ttcagtctgt aaatactttt ttggaaaata gaaattttta ttgctttaaa aaaaaaaaaa
2701 aaaaa
//