LOCUS BC071849 1397 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
H, mRNA (cDNA clone MGC:88510 IMAGE:5935599), complete cds.
ACCESSION BC071849
VERSION BC071849.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1397)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1397)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430187.
FEATURES Location/Qualifiers
source 1..1397
/db_xref="H-InvDB:HIT000264662"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88510 IMAGE:5935599"
/tissue_type="Blood, natural killer cell"
/clone_lib="NIH_MGC_106"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1397
/gene="PIGH"
/gene_synonym="GPI-H"
/db_xref="GeneID:5283"
/db_xref="HGNC:HGNC:8964"
/db_xref="MIM:600154"
CDS 46..612
/gene="PIGH"
/gene_synonym="GPI-H"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class H"
/protein_id="AAH71849.1"
/db_xref="GeneID:5283"
/db_xref="HGNC:HGNC:8964"
/db_xref="MIM:600154"
/translation="MEDERSFSDICGGRLALQRRYYSPSCREFCLSCPRLSLRSLTAV
TCTVWLAAYGLFTLCENSMILSAAIFITLLGLLGYLHFVKIDQETLLIIDSLGIQMTS
SYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLKDPVEPHGISQVVPVFQSA
KPRLDCLIEVYRSCQEILAHQKATSTSP"
BASE COUNT 388 a 316 c 316 g 377 t
ORIGIN
1 gcgcagtgca gcgccgtgcg gtgcgggcgg ccgagtgggg gcgtcatgga ggatgagcgg
61 agcttttcgg atatctgcgg cggccgcctg gcgctgcagc gccgctacta ctccccgtcc
121 tgccgggaat tctgcctcag ctgccctcgg ctctcgctgc gttcgctcac cgctgtcacc
181 tgcacggtgt ggctggcggc ctacggactc ttcaccctct gcgagaacag catgatcctc
241 tctgctgcca tcttcatcac cctcttaggt ctgcttggtt atctccattt tgtgaagatt
301 gatcaggaga ctctgttaat cattgattcc cttggcattc agatgacttc atcttatgct
361 tcaggcaaag aaagcactac cttcatagaa atgggcaagg tcaaggatat tgtcatcaat
421 gaggccattt acatgcagaa ggtgatttac tacctctgca tcttattgaa agatccagtg
481 gaaccacatg ggatatccca agtagtaccc gtcttccaga gtgccaagcc ccggctggac
541 tgcttgattg aagtatacag gagctgccag gagatcctgg cacaccagaa agccacatca
601 acaagcccat gagccccagc gttcagaagg ccagcattgt cttccatggg agatgactct
661 taagccatag gggctggttt tccgtactcc aaaccatcag gtggacacag tcctaggaac
721 cattatggat gtagtgcatc ttagagccat agagcaggtg actggaaatc taactcagta
781 tatttccgtg tattatagtg ttttccttgt aaggttttgc ctactttacc aaaggagggg
841 agaccttaag aattttgaca cagtatgtca aaagtaatgt cagcaaagaa cactttcgga
901 aattgctaag catgttcagg tttactttgt tgatgtttgt gaagcaaaac aatgggaaac
961 tgacatcaga tgtcttgaga aagctatatt ttccaatagt accccttgtg taaagttacg
1021 aaaaaaacaa gcccttcagt actggttagc aggaagaaat gtcctacaaa agacgagtct
1081 gtcaacctag tgcctgtgtt ctgtacaggg cttatttatt tactgttaat aaacagatct
1141 tccaaaacac acagttacct ggttcacaga tagctgcttt ttattgacaa acaagatcat
1201 agtatttcag tcatggtgtc aagcacatta atacttttct gttactcagc attttttttt
1261 atatcagttc aaaagctact tttgccaaga aggatgagac aaaaggccag acagaaattg
1321 gactttggtt ttcagacatg ggactctcat gttaacaaag aataaataag caaatattga
1381 aaaaaaaaaa aaaaaaa
//