LOCUS BC071844 1367 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 7, mRNA (cDNA clone MGC:88505 IMAGE:6729592),
complete cds.
ACCESSION BC071844
VERSION BC071844.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1367)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1367)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: p Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222214.
FEATURES Location/Qualifiers
source 1..1367
/db_xref="H-InvDB:HIT000264658"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88505 IMAGE:6729592"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1367
/gene="CLDN7"
/gene_synonym="claudin-1"
/gene_synonym="Hs.84359"
/db_xref="GeneID:1366"
/db_xref="HGNC:HGNC:2049"
/db_xref="MIM:609131"
CDS 241..876
/gene="CLDN7"
/gene_synonym="claudin-1"
/gene_synonym="Hs.84359"
/codon_start=1
/product="claudin 7"
/protein_id="AAH71844.1"
/db_xref="GeneID:1366"
/db_xref="HGNC:HGNC:2049"
/db_xref="MIM:609131"
/translation="MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQ
AMYKGLWMDCVTQSTGMMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGM
KCTRCGGDDKVKKARIAMGGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYE
FGPAIFIGWAGSALVILGGALLSCSCPGNESKAGYRVPRSYPKSNSSKEYV"
BASE COUNT 281 a 358 c 375 g 353 t
ORIGIN
1 aaccaccctc ccggcgtatc ctactccctg tgccgcgagg ccatcgcttc actggagggg
61 tcgatttgtg tgtagtttgg tgacaagatt tgcattcacc tggcccaaac cctttttgtc
121 tctttgggtg accggaaaac tccacctcaa gttttctttt gtggggctgc cccccaagtg
181 tcgtttgttt tactgtaggg tctccccgcc cggcgccccc agtgttttct gagggcggaa
241 atggccaatt cgggcctgca gttgctgggc ttctccatgg ccctgctggg ctgggtgggt
301 ctggtggcct gcaccgccat cccgcagtgg cagatgagct cctatgcggg tgacaacatc
361 atcacggccc aggccatgta caaggggctg tggatggact gcgtcacgca gagcacgggg
421 atgatgagct gcaaaatgta cgactcggtg ctcgccctgt ccgcggcctt gcaggccact
481 cgagccctaa tggtggtctc cctggtgctg ggcttcctgg ccatgtttgt ggccacgatg
541 ggcatgaagt gcacgcgctg tgggggagac gacaaagtga agaaggcccg tatagccatg
601 ggtggaggca taattttcat cgtggcaggt cttgccgcct tggtagcttg ctcctggtat
661 ggccatcaga ttgtcacaga cttttataac cctttgatcc ctaccaacat taagtatgag
721 tttggccctg ccatctttat tggctgggca gggtctgccc tagtcatcct gggaggtgca
781 ctgctctcct gttcctgtcc tgggaatgag agcaaggctg ggtaccgtgt accccgctct
841 taccctaagt ccaactcttc caaggagtat gtgtgacctg ggatctcctt gccccagcct
901 gacaggctat gggagtgtct agatgcctga aagggcctgg ggctgagctc agcctgtggg
961 cagggtgccg gacaaaggcc tcctggtcac tctgtccctg cactccatgt atagtcctct
1021 tgggttgggg gtgggggggt gccgttggtg ggagagacaa aaagagggag agtgtgcttt
1081 ttgtacagta ataaaaaata agtattggga agcaggcttt tttcccttca gggcctctgc
1141 tttcctcccg tccagatcct tgcagggagc ttggaacctt agtgcaccta cttcagttca
1201 gaacacttag caccccactg actccactga caattgacta aaagatgcag gtgctcgtat
1261 ctcgacattc attcccaccc ccctcttatt taaatagcta ccaaagtact tcttttttaa
1321 taaaaaaata aagattttta ttaggtaaaa aaaaaaaaaa aaaaaaa
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