LOCUS BC071756 1321 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens succinate dehydrogenase complex, subunit D, integral
membrane protein, mRNA (cDNA clone MGC:88309 IMAGE:6450992),
complete cds.
ACCESSION BC071756
VERSION BC071756.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1321)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1321)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506864.
FEATURES Location/Qualifiers
source 1..1321
/db_xref="H-InvDB:HIT000264576"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88309 IMAGE:6450992"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1321
/gene="SDHD"
/gene_synonym="CBT1"
/gene_synonym="SDH4"
/db_xref="GeneID:6392"
/db_xref="HGNC:HGNC:10683"
/db_xref="MIM:602690"
CDS 10..489
/gene="SDHD"
/gene_synonym="CBT1"
/gene_synonym="SDH4"
/codon_start=1
/product="succinate dehydrogenase complex, subunit D,
integral membrane protein"
/protein_id="AAH71756.1"
/db_xref="GeneID:6392"
/db_xref="HGNC:HGNC:10683"
/db_xref="MIM:602690"
/translation="MAVLWRLSAVCGALGGRALLLRTPVVRPAHISAFLQDRPIPEWC
GVQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLH
GHWGLGQVVTDYVHGDALQKAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWKL"
BASE COUNT 394 a 256 c 256 g 415 t
ORIGIN
1 aggaacgaga tggcggttct ctggaggctg agtgccgttt gcggtgccct aggaggccga
61 gctctgttgc ttcgaactcc agtggtcaga cctgctcata tctcagcatt tcttcaggac
121 cgacctatcc cagaatggtg tggagtgcag cacatacact tgtcaccgag ccaccattct
181 ggctccaagg ctgcatctct ccactggact agcgagaggg ttgtcagtgt tttgctcctg
241 ggtctgcttc cggctgctta tttgaatcct tgctctgcga tggactattc cctggctgca
301 gccctcactc ttcatggtca ctggggcctt ggacaagttg ttactgacta tgttcatggg
361 gatgccttgc agaaagctgc caaggcaggg cttttggcac tttcagcttt aacctttgct
421 gggctttgct atttcaacta tcacgatgtg ggcatctgca aagctgttgc catgctgtgg
481 aagctctgac ctttttgact tcatactttg aagaattgat gtatgcctct ttgcctctgc
541 tttgtcatgc cattaagctc acaataagga agaaataaca gataagtcca ttggtggaca
601 gccttcttct cttaatcaca agattatttt cagaatttaa tctttgagga aaaggtttga
661 gaggaattat atctaagttg tgagactgag ttctatattc tggtgagtta atggggttgc
721 ctcccagctt cttataagac tcacagtata actaaacatg atatatcagc ttttgccttt
781 caatttatca atctcttaaa gagaatccaa ctttattacg attagtatat gatcaaactt
841 ccatatttgc cttgggaata atggacaaag ggaaatactc ttaattcatg aataaaaact
901 ttgcagaaaa ttagacagtg tttaattttc gaaaacttcc ctctctagac agtagatacc
961 acctactgat ggttacatat actagggaaa ttttaaaatt aggaaatgct gatagctcat
1021 attataaatt tctaaatcct aggaagaaac gcttggagtg cttctgaata tacagaagtt
1081 ccatttaagg gcaagtttcc ccgtagatgt atcaaaatac taccaactgt aaattgagat
1141 ttaattccca aatgtattct acttgttcta aaacaatctg tccacaaata taaaactata
1201 agtaataaat tgttattttc gcacaatggg aatctctaat gtgaaaatgt attctatgaa
1261 aataattttt ttaaataaaa tgttatataa taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 a
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