LOCUS BC071755 1336 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens succinate dehydrogenase complex, subunit D, integral
membrane protein, mRNA (cDNA clone MGC:88308 IMAGE:4774525),
complete cds.
ACCESSION BC071755
VERSION BC071755.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1336)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1336)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: g Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506864.
FEATURES Location/Qualifiers
source 1..1336
/db_xref="H-InvDB:HIT000264575"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88308 IMAGE:4774525"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1336
/gene="SDHD"
/gene_synonym="CBT1"
/gene_synonym="SDH4"
/db_xref="GeneID:6392"
/db_xref="HGNC:HGNC:10683"
/db_xref="MIM:602690"
CDS 28..507
/gene="SDHD"
/gene_synonym="CBT1"
/gene_synonym="SDH4"
/codon_start=1
/product="succinate dehydrogenase complex, subunit D,
integral membrane protein"
/protein_id="AAH71755.1"
/db_xref="GeneID:6392"
/db_xref="HGNC:HGNC:10683"
/db_xref="MIM:602690"
/translation="MAVLWRLSAVCGALGGRALLLRTPVVRPAHISAFLQDRPIPEWC
GVQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLH
GHWGLGQVVTDYVHGDALQKAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWKL"
BASE COUNT 395 a 263 c 261 g 417 t
ORIGIN
1 ggatgacctt gagccctcag gaacgagatg gcggttctct ggaggctgag tgccgtttgc
61 ggtgccctag gaggccgagc tctgttgctt cgaactccag tggtcagacc tgctcatatc
121 tcagcatttc ttcaggaccg acctatccca gaatggtgtg gagtgcagca catacacttg
181 tcaccgagcc accattctgg ctccaaggct gcatctctcc actggactag cgagagggtt
241 gtcagtgttt tgctcctggg tctgcttccg gctgcttatt tgaatccttg ctctgcgatg
301 gactattccc tggctgcagc cctcactctt catggtcact ggggccttgg acaagttgtt
361 actgactatg ttcatgggga tgccttgcag aaagctgcca aggcagggct tttggcactt
421 tcagctttaa cctttgctgg gctttgctat ttcaactatc acgatgtggg catctgcaaa
481 gctgttgcca tgctgtggaa gctctgacct ttttgacttc atactttgaa gaattgatgt
541 atgcctcttt gcctctgctt tgtcatgcca ttaagctcac aataaggaag aaataacaga
601 taagtccatt ggtggacagc cttcttctct taatcacaag attattttca gaatttaatc
661 tttgaggaaa aggtttgaga ggaattatat ctaagttgtg agactgagtt ctatattctg
721 gtgagttaat ggggttgcct cccagcttct tataagactc acagtataac taaacatgat
781 atatcagctt ttgcctttca atttatcaat ctcttaaaga gaatccaact ttattacgat
841 tagtatatga tcaaacttcc atatttgcct tgggaataat ggacaaaggg aaatactctt
901 aattcatgaa taaaaacttt gcagaaaatt agacagtgtt taattttcga aaacttccct
961 ctctagacag tagataccac ctactgatgg ttacatatac tagggaaatt ttaaaattag
1021 gaaatgctga tagctcatat tataaatttc taaatcctag gaagaaacgc ttggagtgct
1081 tctgaatata cagaagttcc atttaagggc aagtttcccc gtagatgtat caaaatacta
1141 ccaactgtaa attgagattt aattcccaaa tgtattctac ttgttctaaa acaatctgtc
1201 cacaaatata aaactataag taataaattg ttattttcgc acaatgggaa tctctaatgt
1261 gaaaatgtat tctatgaaaa taattttttt aaataaaatg ttatacaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaa
//