LOCUS BC071754 1859 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens CD40 ligand, mRNA (cDNA clone MGC:88303 IMAGE:30418744), complete cds. ACCESSION BC071754 VERSION BC071754.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1859) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1859) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Narayan Bhat cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: p Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58331233. FEATURES Location/Qualifiers source 1..1859 /db_xref="H-InvDB:HIT000264574" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88303 IMAGE:30418744" /tissue_type="Blood, peripheral blood mononuclear cells (PBMC) cytoplasmic poly A RNA is pooled sample from 3 and 6 hr after stimulation with PMA and Ionomycin. These reagents are used to activate T- cells that results in lymphokine and cytokine production." /clone_lib="NIH_MGC_191" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1859 /gene="CD40LG" /gene_synonym="CD154" /gene_synonym="CD40L" /gene_synonym="gp39" /gene_synonym="hCD40L" /gene_synonym="IGM" /gene_synonym="T-BAM" /gene_synonym="TRAP" /db_xref="GeneID:959" /db_xref="HGNC:HGNC:11935" /db_xref="MIM:300386" CDS 73..858 /gene="CD40LG" /gene_synonym="CD154" /gene_synonym="CD40L" /gene_synonym="gp39" /gene_synonym="hCD40L" /gene_synonym="IGM" /gene_synonym="T-BAM" /gene_synonym="TRAP" /codon_start=1 /product="CD40 ligand" /protein_id="AAH71754.1" /db_xref="GeneID:959" /db_xref="HGNC:HGNC:11935" /db_xref="MIM:300386" /translation="MIETYNQTSPRSAATGLPISMKIFMYLLTVFLITQMIGSALFAV YLHRRLDKIEDERNLHEDFVFMKTIQRCNTGERSLSLLNCEEIKSQFEGFVKDIMLNK EETKKENSFEMQKGDQNPQIAAHVISEASSKTTSVLQWAEKGYYTMSNNLVTLENGKQ LTVKRQGLYYIYAQVTFCSNREASSQAPFIASLCLKSPGRFERILLRAANTHSSAKPC GQQSIHLGGVFELQPGASVFVNVTDPSQVSHGTGFTSFGLLKL" BASE COUNT 545 a 462 c 349 g 503 t ORIGIN 1 actttgacag tcttctcatg ctgcctctgc caccttctct gccagaagat accatttcaa 61 ctttaacaca gcatgatcga aacatacaac caaacttctc cccgatctgc ggccactgga 121 ctgcccatca gcatgaaaat ttttatgtat ttacttactg tttttcttat cacccagatg 181 attgggtcag cactttttgc tgtgtatctt catagaaggt tggacaagat agaagatgaa 241 aggaatcttc atgaagattt tgtattcatg aaaacgatac agagatgcaa cacaggagaa 301 agatccttat ccttactgaa ctgtgaggag attaaaagcc agtttgaagg ctttgtgaag 361 gatataatgt taaacaaaga ggagacgaag aaagaaaaca gctttgaaat gcaaaaaggt 421 gatcagaatc ctcaaattgc ggcacatgtc ataagtgagg ccagcagtaa aacaacatct 481 gtgttacagt gggctgaaaa aggatactac accatgagca acaacttggt aaccctggaa 541 aatgggaaac agctgaccgt taaaagacaa ggactctatt atatctatgc ccaagtcacc 601 ttctgttcca atcgggaagc ttcgagtcaa gctccattta tagccagcct ctgcctaaag 661 tcccccggta gattcgagag aatcttactc agagctgcaa atacccacag ttccgccaaa 721 ccttgcgggc aacaatccat tcacttggga ggagtatttg aattgcaacc aggtgcttcg 781 gtgtttgtca atgtgactga tccaagccaa gtgagccatg gcactggctt cacgtccttt 841 ggcttactca aactctgaac agtgtcacct tgcaggctgt ggtggagctg acgctgggag 901 tcttcataat acagcacagc ggttaagccc accccctgtt aactgcctat ttataaccct 961 aggatcctcc ttatggagaa ctatttatta tacactccaa ggcatgtaga actgtaataa 1021 gtgaattaca ggtcacatga aaccaaaacg ggccctgctc cataagagct tatatatctg 1081 aagcagcaac cccactgatg cagacatcca gagagtccta tgaaaagaca aggccattat 1141 gcacaggttg aattctgagt aaacagcaga taacttgcca agttcagttt tgtttctttg 1201 cgtgcagtgt ctttccatgg ataatgcatt tgatttatca gtgaagatgc agaagggaaa 1261 tggggagcct cagctcacat tcagttatgg ttgactctgg gttcctatgg ccttgttgga 1321 gggggccagg ctctagaacg tctaacacag tggagaaccg aaaccccccc cccccgccac 1381 cctctcggac agttattcat tctctttcaa tctctctctc tccatctctc tctttcagtc 1441 tctctctctc aacctctttc ttccaatctc tctttctcaa tctctctgtt tccctttgtc 1501 agtctcttcc ctcccccagt ctctcttctc aatccccctt tctaacacac acacacacac 1561 acacacacac acacacacac acacacacac acacacagag tcaggccgtt gctagtcagt 1621 tctcttcttt ccaccctgtc cctatctcta ccactataga tgagggtgag gagtagggag 1681 tgcagccctg agcctgccca ctcctcatta cgaaatgact gtatttaaag gaaatctatt 1741 gtatctacct gcagtctcca ttgtttccag agtgaacttg taattatctt gttatttatt 1801 ttttgaataa taaagacctc ttaacattaa gaaaaaaaaa aaaaaaaaaa aaaaaaaaa //