LOCUS BC071747 1618 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens claudin 2, mRNA (cDNA clone MGC:88250 IMAGE:30322852),
complete cds.
ACCESSION BC071747
VERSION BC071747.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1618)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9966780.
FEATURES Location/Qualifiers
source 1..1618
/db_xref="H-InvDB:HIT000264567"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88250 IMAGE:30322852"
/tissue_type="Skin and meninges pool- skin, dura matter,
pia matter, choroid plexus."
/clone_lib="NIH_MGC_186"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1618
/gene="CLDN2"
/db_xref="GeneID:9075"
CDS 328..1020
/gene="CLDN2"
/codon_start=1
/product="CLDN2 protein"
/protein_id="AAH71747.1"
/db_xref="GeneID:9075"
/translation="MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAV
GFSKGLWMECATHSTGITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGM
RCTVFCQESRAKDRVAVAGGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEI
GEALYLGIISSLFSLIAGIILCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVK
SEFNSYSLTGYV"
BASE COUNT 372 a 461 c 376 g 409 t
ORIGIN
1 cagatggatt ttgcaaagct gtggttaacg attagaaatc ctttatcacc tcagcccgtg
61 gccccttgta cttcgctccc ctccctcagg atccctttct ccctctccag gggcatctcc
121 ccctccaagg ctctgcaaag aactgccctg tcttctagat gccttcttga ggctgcttgt
181 ggccacccac agacacttgt aaggaggaga gaagtcagcc tggcagagag actctgaaat
241 gagggattag aggtgttcaa ggagcaagag cttcagcctg aagacaaggg agcagtccct
301 gaagacgctt ctactgagag gtctgccatg gcctctcttg gcctccaact tgtgggctac
361 atcctaggcc ttctggggct tttgggcaca ctggttgcca tgctgctccc cagctggaaa
421 acaagttctt atgtcggtgc cagcattgtg acagcagttg gcttctccaa gggcctctgg
481 atggaatgtg ccacacacag cacaggcatc acccagtgtg acatctatag cacccttctg
541 ggcctgcccg ctgacatcca ggctgcccag gccatgatgg tgacatccag tgcaatctcc
601 tccctggcct gcattatctc tgtggtgggc atgagatgca cagtcttctg ccaggaatcc
661 cgagccaaag acagagtggc ggtagcaggt ggagtctttt tcatccttgg aggcctcctg
721 ggattcattc ctgttgcctg gaatcttcat gggatcctac gggacttcta ctcaccactg
781 gtgcctgaca gcatgaaatt tgagattgga gaggctcttt acttgggcat tatttcttcc
841 ctgttctccc tgatagctgg aatcatcctc tgcttttcct gctcatccca gagaaatcgc
901 tccaactact acgatgccta ccaagcccaa cctcttgcca caaggagctc tccaaggcct
961 ggtcaacctc ccaaagtcaa gagtgagttc aattcctaca gcctgacagg gtatgtgtga
1021 agaaccaggg gccagagctg gggggtggct gggtctgtga aaaacagtgg acagcacccc
1081 gagggccaca ggtgagggac actaccactg gatcgtgtca gaaggtgctg ctgaggatag
1141 actggcttct gaaaaattcc agcacacctc ctcgaacctc attgtcagca gagagggccc
1201 atctgttgtc tgtaacatgc ctttcacatg tccaccttct tgccatgttc cagctgctct
1261 cccaacctgg aaggccgtct ccccttagcc aagtcctcct caggcttgga gaacttcctc
1321 agcgtcacct ccttcattga gccttctctg atcactccat ccctctccta cccctccctc
1381 ccccaaccct caatgtataa attgcttctt gatgcttagc attcacaatt tttgattgat
1441 cgttatttgt gtgtgtgtgt ccgatctcac aagtatattg taaacccttc ggtgggtggg
1501 ggccatatcc tagacctctc tgtatccccc agactatctg taacagtgcc aggcacacag
1561 taggtgatca ataaacactt gttgattaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//