LOCUS BC071738 1614 bp mRNA linear HUM 15-JUN-2004
DEFINITION Homo sapiens T cell receptor alpha locus, mRNA (cDNA clone
IMAGE:5203575), partial cds.
ACCESSION BC071738
VERSION BC071738.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1614)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: j Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..1614
/db_xref="H-InvDB:HIT000264558"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5203575"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 395 a 452 c 357 g 410 t
ORIGIN
1 ggctgatgta gctcactgat gtctgtgtag acagggagct gtgacgagag caagaggtca
61 gaacacatcc agactcctta agagaaagcc tttctgtttt ggaaactttt caaagccagg
121 gacttgtcca gcccaacctc cccattgctc ctagctcctg aggctcagga cccctggctt
181 ctgtcctccc tgctcagggt cctgcagcgt tgcctctgct cagccatgct cctgctgctc
241 gtcccagtgc tcgaggtgat ttttactctg ggaggaacca gagcccagtc ggtgacccag
301 cttgacagcc acgtctctgt ctctgaagga accccggtgc tgctgaggtg caactactca
361 tcttcttatt caccatctct cttctggtat gtgcaacacc ccaacaaagg actccagctt
421 ctcctgaagt acacatcagc ggccaccctg gttaaaggca tcaacggttt tgaggctgaa
481 tttaagaaga gtgaaacctc cttccacctg acgaaaccct cagcccatat gagcgacgcg
541 gctgagtact tctgtgccct cccaatgcag gcaaatcaac ctttggggat gggactacgc
601 tcactgtgaa gccaaatatc cagaaccctg accctgccgt gtaccagctg agagactcta
661 aatccagtga caagtctgtc tgcctattca ccgattttga ttctcaaaca aatgtgtcac
721 aaagtaagga ttctgatgtg tatatcacag acaaaactgt gctagacatg aggtctatgg
781 acttcaagag caacagtgct gtggcctgga gcaacaaatc tgactttgca tgtgcaaacg
841 ccttcaacaa cagcattatt ccagaagaca ccttcttccc cagcccagaa agttcctgtg
901 atgtcaagct ggtcgagaaa agctttgaaa cagatacgaa cctaaacttt caaaacctgt
961 cagtgattgg gttccgaatc ctcctcctga aagtggccgg gtttaatctg ctcatgacgc
1021 tgcggctgtg gtccagctga gatctgcaag attgtaagac agcctgtgct ccctcgctcc
1081 ttcctctgca ttgcccctct tctccctctc caaacagagg gaactctccc acccccaagg
1141 aggtgaaagc tgctaccacc tctgtgcccc cccggcaatg ccaccaactg gatcctaccc
1201 gaatttatga ttaagattgc tgaagagctg ccaaacactg ctgccacccc ctctgttccc
1261 ttattgctgc ttgtcactgc ctgacattca cggcagaggc aaggctgctg cagcctcccc
1321 tggctgtgca cattccctcc tgctccccag agactgcctc cgccatccca cagatgatgg
1381 atcttcagtg ggttctcttg ggctctaggt cctgcagaat gttgtgaggg gtttattttt
1441 tttttaatag tgttcataaa gaaatacata gtattcttct tctcaagacg tggggggaaa
1501 ttatctcatt atcgaggccc tgctatgctg tgtatctggg cgtgttgtat gtcctgctgc
1561 cgatgccttc attaaaatga tttggaagaa aaaaaaaaaa aaaaaaaaaa aaaa
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