LOCUS BC071721 1716 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens interferon regulatory factor 3, mRNA (cDNA clone
MGC:88024 IMAGE:5494536), complete cds.
ACCESSION BC071721
VERSION BC071721.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1716)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1716)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504724.
FEATURES Location/Qualifiers
source 1..1716
/db_xref="H-InvDB:HIT000264541"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88024 IMAGE:5494536"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1716
/gene="IRF3"
/db_xref="GeneID:3661"
/db_xref="MIM:603734"
CDS 343..1626
/gene="IRF3"
/codon_start=1
/product="IRF3 protein"
/protein_id="AAH71721.1"
/db_xref="GeneID:3661"
/db_xref="MIM:603734"
/translation="MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQ
DAQQEDFGIFQAWAEATGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHD
PHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSL
AVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQ
TISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWR
AGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTE
GSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVD
LHISNSHPLSLTSDQYKAYLQDLVEGMDFQGPGES"
BASE COUNT 358 a 486 c 561 g 311 t
ORIGIN
1 cccacgcgtc cgctaccctg aaagtgggga tacttacttt cgatgatgtg ggggagggag
61 gaggtctata ctggcggaat tgagggagtg gagggtctgc actgaagacg ctggggaagg
121 atgtgccatg gatatgggaa ggaaccctag ctgattagag agcctctcgg gaggatggga
181 ggatgggaag aggaggtttc ctgtttgtac ccccgaaaat atgggtgaag gacctgtgcc
241 gtggcccgtg agaaggaggt ctgggtgcgg aaactccagg ccaggtgggt ccgggggagg
301 ccggtcgcgc ccaggaaatg ccctatacgc gcaggccgga ccatgggaac cccaaagcca
361 cggatcctgc cctggctggt gtcgcagctg gacctggggc aactggaggg cgtggcctgg
421 gtgaacaaga gccgcacgcg cttccgcatc ccttggaagc acggcctacg gcaggatgca
481 cagcaggagg atttcggaat cttccaggcc tgggccgagg ccactggtgc atatgttccc
541 gggagggata agccagacct gccaacctgg aagaggaatt tccgctctgc cctcaaccgc
601 aaagaagggt tgcgtttagc agaggaccgg agcaaggacc ctcacgaccc acataaaatc
661 tacgagtttg tgaactcagg agttggggac ttttcccagc cagacacctc tccggacacc
721 aatggtggag gcagtacttc tgatacccag gaagacattc tggatgagtt actgggtaac
781 atggtgttgg ccccactccc agatccggga cccccaagcc tggctgtagc ccctgagccc
841 tgccctcagc ccctgcggag ccccagcttg gacaatccca ctcccttccc aaacctgggg
901 ccctctgaga acccactgaa gcggctgttg gtgccggggg aagagtggga gttcgaggtg
961 acagccttct accggggccg ccaagtcttc cagcagacca tctcctgccc ggagggcctg
1021 cggctggtgg ggtccgaagt gggagacagg acgctgcctg gatggccagt cacactgcca
1081 gaccctggca tgtccctgac agacagggga gtgatgagct acgtgaggca tgtgctgagc
1141 tgcctgggtg ggggactggc tctctggcgg gccgggcagt ggctctgggc ccagcggctg
1201 gggcactgcc acacatactg ggcagtgagc gaggagctgc tccccaacag cgggcatggg
1261 cctgatggcg aggtccccaa ggacaaggaa ggaggcgtgt ttgacctggg gcccttcatt
1321 gtagatctga ttaccttcac ggaaggaagc ggacgctcac cacgctatgc cctctggttc
1381 tgtgtggggg agtcatggcc ccaggaccag ccgtggacca agaggctcgt gatggtcaag
1441 gttgtgccca cgtgcctcag ggccttggta gaaatggccc gggtaggggg tgcctcctcc
1501 ctggagaata ctgtggacct gcacatttcc aacagccacc cactctccct cacctccgac
1561 cagtacaagg cctacctgca ggacttggtg gagggcatgg atttccaggg ccctggggag
1621 agctgagccc tcgctcctca tggtgtgcct ccaacccccc tgttccccac cacctcaacc
1681 aataaactgg ttcctgctat gaaaaaaaaa aaaaaa
//