LOCUS BC071707 1200 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:87991 IMAGE:3849426), complete cds.
ACCESSION BC071707
VERSION BC071707.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1200)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1200)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50233912.
FEATURES Location/Qualifiers
source 1..1200
/db_xref="H-InvDB:HIT000264528"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87991 IMAGE:3849426"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1200
/gene="HMGN2"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
CDS 96..368
/gene="HMGN2"
/gene_synonym="MGC5629"
/codon_start=1
/product="high-mobility group nucleosomal binding domain
2"
/protein_id="AAH71707.1"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 347 a 254 c 276 g 323 t
ORIGIN
1 gaagaggcga gaacgacccc cggaccgacc aaagcccgcg cgccgctgca tcccgcgtcc
61 agcacctacg tcccgctgcc gtcgccgccg ccaccatgcc caagagaaag gctgaagggg
121 atgctaaggg agataaagca aaggtgaagg acgaaccaca gagaagatcc gcgaggttgt
181 ctgctaaacc tgctcctcca aagccagagc ccaagcctaa aaaggcccct gcaaagaagg
241 gagagaaggt acccaaaggg aaaaagggaa aagctgatgc tggcaaggag gggaataacc
301 ctgcagaaaa tggagatgcc aaaacagacc aggcacagaa agctgaaggt gctggagatg
361 ccaagtgaag tgtgtgcatt tttgataact gtgtacttct ggtgactgta cagtttgaaa
421 tactattttt tatcaagttt tataaaaatg cagaattttg ttttactttt tttttttttt
481 taaaagctat gttgttagca cacagaacac ttcattgttg tttttggggg aaggggcata
541 tgtcactaat agaatgtctc caaagctgga ttgatgtgga gaaaacacct ttcccttcta
601 gttttgagag acttcctctt ggctcccagg aggagggatt ccctgacttt gacacacatg
661 gccaccttgg cacaaaagcc ttgtggtata gaaaaacaaa tttgttttta tgtcctcttc
721 tccctttcca tctttcagca tagacttaac tcccttaagc ccagacatct gttgagacct
781 gacccctagt cattggttac cagtgtgtca ggcaatctgg actttccagt gatgccactg
841 agatggcacc tgtcaaaaga gcagtggttc catttctaga ttgtggatct tcagataaat
901 tctgccattt tcatttcact tcctgaaagt cagggtcggc ttgtgaaaag ttgttaaaca
961 acatgctaaa tgtgaaatgt caaccctcac tctaaacttt ccctgttcag agcatcagat
1021 gaagacttca ttgggtttta tagtggcttt ctgatttttg gtagtccatt gaagaaggga
1081 gtttgaaagt tgttgtatac tgttaacgat tgtctgccca tgtcctgcct gaaataccat
1141 gattgtttat ggaaagtatc tttaataaag ctggatacag tttgaaaaaa aaaaaaaaaa
//