LOCUS BC071683 1430 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dexamethasone-induced transcript, mRNA (cDNA clone
MGC:87910 IMAGE:5190179), complete cds.
ACCESSION BC071683
VERSION BC071683.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1430)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1430)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33620720.
FEATURES Location/Qualifiers
source 1..1430
/db_xref="H-InvDB:HIT000264507"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87910 IMAGE:5190179"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1430
/gene="DEXI"
/gene_synonym="MYLE"
/db_xref="GeneID:28955"
CDS 295..582
/gene="DEXI"
/gene_synonym="MYLE"
/codon_start=1
/product="dexamethasone-induced transcript"
/protein_id="AAH71683.1"
/db_xref="GeneID:28955"
/translation="MLGARVAAHLDALGPLVPYVPPPLLPSMFYVGLFFVNVLILYYA
FLMEYIVLNVGLVFLPEDMDQALVDLGVLSDPGSGLYDADSELDVFDAYLE"
BASE COUNT 276 a 435 c 420 g 299 t
ORIGIN
1 gcgccaggga ggcgccacga gggagccggg cagccgcggg ccacttcagg ggggcccgcc
61 tcgccgcccg ggcggtcgag agatccttgg gggcacatct cggggtgcgg tgacccgccc
121 ggcgcatttc gggggtcggg gcgcaattgc caggggacat ctggagcccg gccctgcttc
181 tgtcgggctc cagggtaccc ctggatggct gcgctgtgcc ctcgccggcc gcccgggcgc
241 cgcagcggct gagttcgccg ggatcgccgg gccgccgccc ttgccacccg ctgcatgctc
301 ggcgcccggg tcgcggccca cctggacgca ctgggccccc tggtccccta cgtgccgccg
361 ccgctgctgc cctctatgtt ctacgtgggc ctgttcttcg tcaatgtgct gatcctgtac
421 tacgccttcc tcatggagta catcgtcctc aacgtgggcc tcgtcttcct gcccgaggac
481 atggaccagg cgctcgtgga cctcggcgtg ctctccgacc ccggctcggg cctttacgat
541 gctgactcgg agctcgacgt ctttgatgcg tacttggagt agggtctcga ctgctgttcc
601 cctcttccct acacgatccg caacccatgc cctggaccag ccgcccagat catgccgccg
661 cagctggttg ggggcaccat ctggacgggg atggttcccc aggaggagac cctcccctgc
721 ctccgaggcc tacctgctcc cctcaaaagc ttcgtgccaa cagagaggtt cctgtttgaa
781 cccaggagag tggaagagag attgggactg agtgctgagg ttgggaaggc acctgctccc
841 acagaagggg gaacgcaaga ggcatcccaa gacctcatct gcctgcagtg tcaaatcgat
901 ggcctggcct tggcttctga ttatttgcag ctgcgatgga tgtttacagg aacccagcca
961 gagtttgcct ccctgcactt catcccggag cgcacctgct tcccccactt caccttcgga
1021 gaggacactt caaactgcgg acacacgcaa aagcgactcc cagctccgtt tgatgtgagt
1081 tgagccttca ggccagctgg gtttagcccg aggctggtct tagatgcagc gactgtttca
1141 ggggtgactc agaagaaaaa gaagctgagg aagctgttgg ggggctgagg gtgggattct
1201 cgctccttca tttcaggtta ctcgttcttc agcaagttgg caaaacagac atcatgctgg
1261 tgagtgccac gttactcccc tggctggaaa tgcttttctg aaagtatgag tgttgtgcct
1321 acttaattct gataaacctg tctaagcaat acttaggagg cttacttctt tggattaaaa
1381 aaaaatgtat gcaactccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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