LOCUS BC071662 905 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens ribosomal protein S4, X-linked,
mRNA (cDNA clone MGC:87857 IMAGE:5505465), complete cds.
ACCESSION BC071662
VERSION BC071662.1
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 905)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 905)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39812410.
FEATURES Location/Qualifiers
source 1..905
/db_xref="H-InvDB:HIT000264487"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Lymph, lymphoma"
/db_xref="taxon:32630"
/clone="MGC:87857 IMAGE:5505465"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..905
/gene="RPS4X"
/gene_synonym="CCG2"
/gene_synonym="DXS306"
/gene_synonym="SCAR"
/gene_synonym="SCR10"
/db_xref="GeneID:6191"
/db_xref="HGNC:HGNC:10424"
/db_xref="MIM:312760"
CDS 38..829
/gene="RPS4X"
/gene_synonym="CCG2"
/gene_synonym="DXS306"
/gene_synonym="SCAR"
/gene_synonym="SCR10"
/codon_start=1
/transl_table=11
/product="ribosomal protein S4, X-linked"
/protein_id="AAH71662.1"
/db_xref="GeneID:6191"
/db_xref="HGNC:HGNC:10424"
/db_xref="MIM:312760"
/translation="MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPL
IIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLI
YDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTI
QIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSF
ATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG"
BASE COUNT 255 a 207 c 229 g 214 t
ORIGIN
1 cggacgcgtg ggtcgaccca cgcgtccgaa cgcagccatg gctcgtggtc ccaagaagca
61 tctgaagcgg gtggcagctc caaagcattg gatgctggat aaattgaccg gtgtgtttgc
121 tcctcgtcca tccaccggtc cccacaagtt gagagagtgt ctccccctca tcattttcct
181 gaggaacaga cttaagtatg ccctgacagg agatgaagta aagaagattt gcatgcagcg
241 gttcattaaa atcgatggca aggtccgaac tgatataacc taccctgctg gattcatgga
301 tgtcatcagc attgacaaga cgggagagaa tttccgtctg atctatgaca ccaagggtcg
361 ctttgctgta catcgtatta cacctgagga ggccaagtac aagttgtgca aagtgagaaa
421 gatctttgtg ggcacaaaag gaatccctca tctggtgact catgatgccc gcaccatccg
481 ctaccccgat cccctcatca aggtgaatga taccattcag attgatttgg agactggcaa
541 gattactgat ttcatcaagt tcgacactgg taacctgtgt atggtgactg gaggtgctaa
601 cctaggaaga attggtgtga tcaccaacag agagaggcac cctggatctt ttgacgtggt
661 tcacgtgaaa gatgccaatg gcaacagctt tgccactcga ctttccaaca tttttgttat
721 tggcaagggc aacaaaccat ggatttctct tccccgagga aagggtatcc gcctcaccat
781 tgctgaagag agagacaaaa gactggcggc caaacagagc agtgggtgaa atgggtccct
841 gggtgacatg tcagatcttt gtacgtaatt aaaaatattg tggcaggatt aaaaaaaaaa
901 aaaaa
//