LOCUS BC071604 4841 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens N-acyl phosphatidylethanolamine phospholipase D, mRNA
(cDNA clone MGC:87594 IMAGE:4375696), complete cds.
ACCESSION BC071604
VERSION BC071604.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48675829.
FEATURES Location/Qualifiers
source 1..4841
/db_xref="H-InvDB:HIT000264433"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87594 IMAGE:4375696"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4841
/gene="NAPEPLD"
/gene_synonym="FMP30"
/gene_synonym="NAPE-PLD"
/db_xref="GeneID:222236"
/db_xref="HGNC:HGNC:21683"
CDS 291..1472
/gene="NAPEPLD"
/gene_synonym="FMP30"
/gene_synonym="NAPE-PLD"
/codon_start=1
/product="N-acyl phosphatidylethanolamine phospholipase D"
/protein_id="AAH71604.1"
/db_xref="GeneID:222236"
/db_xref="HGNC:HGNC:21683"
/translation="MDENESNQSLMTSSQYPKEAVRKRQNSARNSGASDSSRFSRKSF
KLDYRLEEDVTKSKKGKDGRFVNPWPTWKNPSIPNVLRWLIMEKDHSSVPSSKEELDK
ELPVLKPYFITNPEEAGVREAGLRVTWLGHATVMVEMDELIFLTDPIFSSRASPSQYM
GPKRFRRSPCTISELPPIDAVLISHNHYDHLDYNSVIALNERFGNELRWFVPLGLLDW
MQKCGCENVIELDWWEENCVPGHDKVTFVFTPSQHWCKRTLMDDNKVLWGSWSVLGPW
NRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYEPRWFMKYQHVDPEEAVRIHTDV
QTKKSMAIHWGTFALANEHYLEPPVKLNEALERYGLNAEDFFVLKHGESRYLNNNDEN
F"
BASE COUNT 1462 a 890 c 948 g 1541 t
ORIGIN
1 tcatcgctgt cgggaacagc gatgactcga gcgggccgag agtgggtttc ccgtccccga
61 gccctccctc atctcggaga tgccgcactt gtgagcgaca gggcttcatt tgaattttcg
121 cacctcgcga gttgcggagc ctgcatctct gaagctgcct cggtgaagag ccacagcatt
181 attttttttc tctttgggag agtagctgtc tgggatttga gatcctatct tccctgcaaa
241 ttaccaggtt gcatcttcac tgataggaat acatttcttc accaaaggac atggatgaaa
301 atgaaagcaa ccagtctctg atgacaagca gccaatatcc taaagaagca gtaagaaaac
361 gtcaaaattc agcacggaat tccggagcaa gtgattcttc taggttttct aggaaaagct
421 tcaaactgga ttatagacta gaagaagatg taactaaatc caagaaagga aaagatggga
481 gatttgtgaa tccgtggcca acatggaaaa acccctctat tccaaatgtt ctcagatggc
541 tgataatgga gaaagatcac agcagtgttc caagttctaa agaggaacta gacaaagaac
601 tcccagtgct taagccatat tttatcacta accctgaaga agctggagtg agggaagctg
661 gcttaagagt cacatggctg ggacatgcca cggtaatggt ggaaatggat gagctcatat
721 ttctcacgga tcccatcttt agctctcgtg cttcaccatc gcagtacatg ggtccaaagc
781 gatttcgtcg ttccccgtgc acaataagtg aactccctcc aatagatgcg gtccttatca
841 gtcacaacca ctatgaccat ctggactaca attctgtcat tgctttgaat gagcgatttg
901 gtaatgagtt gagatggttt gtgcctttgg gtctccttga ctggatgcaa aaatgtggct
961 gtgagaatgt gattgagttg gactggtggg aggagaattg tgtccccgga catgataagg
1021 tcacttttgt ctttacacct tcccagcact ggtgtaaaag gactctaatg gatgacaaca
1081 aggtgctatg gggcagctgg tctgtcttgg ggccttggaa tcgatttttt ttcgcaggag
1141 atactggtta ttgccctgct tttgaagaga taggaaaaag atttggacct tttgaccttg
1201 cagctattcc catcggagct tatgaaccga ggtggtttat gaaataccag catgtagacc
1261 cagaagaagc tgtaaggatt cacactgatg tccaaacaaa gaaatctatg gcaattcact
1321 ggggaacttt tgccttagca aatgagcatt acttagagcc tccagtgaag ctgaatgaag
1381 ctctagagag atacggactt aacgctgaag atttttttgt cttgaagcat ggagaatcaa
1441 gatacctaaa taataatgat gaaaactttt aataaataat ttcctgaggt gaaaaaccga
1501 tattgaagat tcatttttct tttttccatt cttcaggacc ttcggcaagg tgagtcaagg
1561 ctctctacct acctagatgt ttttcagagg cctacaaata caagtatctt tcttatatgc
1621 acattctaat aaatgatgaa attcagtcca acatgcttat tataaacata gcaattcttg
1681 ctctatcaaa ttagcttata tgccaaatat taaatatggt ttatttaggt aagcataaaa
1741 acataggggc tatcattttt aaagacttga ttttctctat tgtggtaaaa tatataaata
1801 catatttgcc attttaaaca tttaccgttt taaccatttt taagtgtaca gttctttcgc
1861 attaatgcac ccatgaccac cattcactta aatttttaaa agaacagtat attctttttt
1921 tcctagagcc ttcagatgag agggaacagt atattctatt gcacgtctac aattcccaaa
1981 agacctctta ctttgggagg ccaaggtggg tgggtcactt gaacccagga gtttgacatc
2041 aacctgggca acatggtgac ctcccgtctc tctcggaaaa aaaaaaaaga aaaaagaaaa
2101 agccgggtga ggtggtgtgt acctgtagtc acaggtactt gggaggctga ggtgggagga
2161 tcacttgagc ccaggagata gaggctgcag tgagctgtga tcgtaccact gcactccagc
2221 ctgggcgaca aaatgagacc ctgtctcaaa agaaagccct ctccttagct gagcagagga
2281 agggaaggag tgtggctatg agaatatgat ttatgccatt ttctgttttt aaatctagaa
2341 gatcttctaa gcacaaatac agctacaatg aaatatttta cagacaaaat gttaatagac
2401 catattcttt gaattaaatt tgtttttaat tttctctaca catttttttt ttcctggagt
2461 ctcttagctc taaatatatc aatcagattt atattttttt ttacctgatt cagatgtctt
2521 acatttttat attaaatgaa ccttaagcat gattcttttg gtaagccagt atgaatgcca
2581 gtggttgggg ggcggggggg ggagtcagtt gacataagat ttagtcctaa taaggactct
2641 gtattcactt gattattctg acccttccta agggagggag gtggattaga taccactgga
2701 ggcccattct gtattcctaa tccagtctca gcactttatt catacaaaat aatcaaaata
2761 ggttttctac accaaatgct acccaggcag tgctctataa tttatttgca cacctgtatg
2821 tgtggtgcca tgttagccac taaatctgaa cttttaccct gctttcatca tggatttttt
2881 tgtgtaacct gaaacaagtc accaatgctc actgtgcctg tttcctcatt tgcaacaaga
2941 ggataattcc gacctacctc tgaaaaatgt gtagattaaa tgagttttta aagcacttta
3001 gaaaatataa gggagaaaat gatttcttaa gatatcactg cctaatatag acaggtatat
3061 ttgaaagcta aatacaggtt aatgcttttg ataatgtatt gttcctgttg caaatttaag
3121 cattatatat taggagacta aacattgaaa actttcactg atttttaaat tggagtaata
3181 gcctaaataa gtgtaaataa tctttatcaa aatttagtgt ttatctacaa agatgcgaat
3241 cagtcaaggg gaaatgtgta tgcaatgtgt gtgtatatga tgtatgcgaa catatgtgat
3301 tttggggtac taaagcacaa aaaaatcccc cataaaataa accttcctga aaagactgat
3361 cataaacttt ttcactccaa gcagatgtga atcaagatgt taggtttatg gtgagttagc
3421 tttgaggtgt gttgccctaa tactagccag cgttgttgta gccatattcc ctgctgctgc
3481 acgccgaatt gaaaatccat ctcttacctc ttctctatga agcaagccag gtatgtcttg
3541 cttaagtatt tcttctccat gaatggcctt aacattattt tgtattcacg tgtactgttt
3601 aactgagggt ctcaaagcac tttaaactgt tgtgttctat ttccactcgt ctggcctgcc
3661 tcatttttct aggccctttt gtaagctgta attttttatt accactcatg ttctttctac
3721 actgacacta ttcattaaga acatcaagct tcatctctgc ttacagaatc tcaccttatt
3781 gagtgggttc cactttattt ttcatttgtt atctacattt tgaagggttt atgtgcaaag
3841 tgaaaacaaa ttttgaaaaa taagacaaat ccattctctt cttcaattca gtctaatatg
3901 cattgtagtg tcttttaatc agtcttatcc tctaagtcaa cttcattttc ctctttgtga
3961 atacccatag caatatgtaa gattttattg aagtttcctg tgataactga ggaacacttt
4021 gctatgcctc actgcccaat agggtgggtc atcaattagg agaaatccca aattataaaa
4081 gccaacatat gccgtgacct acgtaggaaa agatgtattt gtgcatcttc tttctgggta
4141 gttaaaaatt actccctctt ttctctagca ttttgacatt tcagactcaa tgctctgatc
4201 tctagggagt gtgattattc aaactaatga gaggacaaga agacacagtt ttagaatcta
4261 ctgctgctaa agcacattaa aaacaaatcc tggtttttaa tgtatgcata gtttcatatt
4321 taatgaatat gctttcatta aatagggagg tagatttgaa aaaactgtta taaagaaatg
4381 tgccctttgg ggaatgaata cttttgttca tgtctagccc actgggaatt ttgttttcac
4441 cttatactga gtcctttttc taatgtaaaa atatttcttc caagtttgat ttctgtatca
4501 gggtaacatt gagaacacac atatttctgt ttgaggattt gtgacttcct atggaaacag
4561 tcttgcatct atgtatttac aaatgaaatt taaagtattc ttaaagcttt gccttaaata
4621 ctgcttgcat actgatttac ttaatgctaa gcatggcagg ggttataaat ttaaatacta
4681 taagacctgg ctgaatccca gatgtatcaa taaattgtta tagtagctta tggaaaatgc
4741 tattaaagat aaattttcat acattgtatt tttagtcaag taaaatatgg atgaaaatta
4801 ataaagtact gtcaagggaa aaaataaaaa aaaaaaaaaa a
//