LOCUS BC071587 4024 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens arginine and glutamate rich 1, mRNA (cDNA clone
MGC:87318 IMAGE:5271043), complete cds.
ACCESSION BC071587
VERSION BC071587.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4024)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4024)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48675816
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..4024
/db_xref="H-InvDB:HIT000264416"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87318 IMAGE:5271043"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4024
/gene="ARGLU1"
/gene_synonym="RP11-297I6.1"
/db_xref="GeneID:55082"
/db_xref="HGNC:HGNC:25482"
CDS 219..1040
/gene="ARGLU1"
/gene_synonym="RP11-297I6.1"
/codon_start=1
/product="ARGLU1 protein"
/protein_id="AAH71587.1"
/db_xref="GeneID:55082"
/db_xref="HGNC:HGNC:25482"
/translation="MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSR
ESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKRE
EEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRR
VEEAKRIMEKQLLEELERQRQAELAAQKAREVTLGRLESRDSPWQNFQCWVLPPAQFR
KRWNTDYLIPFSSKLNIAAKVNFLAYSEVLTDNLKVGSFYKTYSRILFDLMELAI"
BASE COUNT 1186 a 731 c 874 g 1233 t
ORIGIN
1 gcggctgcca tcttaggggc gcctggcgct acgggtttct cgttggaggc ggccttcgtg
61 gcagctgtag acgccgggaa aaggcataaa gtccgttggc cgacaccttt ctttcctccg
121 gcctcggtag aaccgccagc ccgcgtccga aggcggaggc gaggggaact ggccgcgtga
181 ggggcctgag gcgagcggtt agagcgtctc ccggaaggat gggccggtct cggagccgga
241 gctcgtcccg ctccaagcac accaagagca gcaagcacaa caagaagcgc agccggtccc
301 ggtcgcgatc ccgggacaag gagcgcgtgc ggaagcgttc caaatctcgg gaaagtaaac
361 ggaaccggcg gcgggagtcg cggtcccgtt cgcgctccac caacacggcc gtgtcccggc
421 gcgagcggga ccgggagcgc gcctcgtccc cgcccgaccg catcgacatc ttcgggcgca
481 cggtgagcaa gcgcagcagc ctggacgaga agcagaagcg agaggaggag gagaagaaag
541 cggagttcga gcggcagcga aaaattcgac agcaagaaat agaagaaaaa ctcatcgagg
601 aagaaacagc acgaagagta gaagaattgg tagcaaaaag ggtggaggaa gaactggaga
661 aaaggaagga tgaaattgaa cgagaagttc tccgaagggt ggaggaagcc aaacgcatca
721 tggaaaagca gttgctcgaa gaactcgagc gacagagaca agctgagctt gccgcacaaa
781 aagctagaga ggtaacgctc ggtcgtttgg aaagtagaga cagtccatgg caaaactttc
841 agtgttgggt tctgcctcct gctcagttca gaaagagatg gaatacagac tatctaattc
901 ctttctcgtc taaacttaac attgctgcga aagttaattt tttagcctat tcagaggtgc
961 tgactgataa cttaaaagtt ggaagctttt ataaaacata ttcaaggata ctttttgatt
1021 taatggaact ggctatttga gaagtgtttg aaacttttgc catggctgca ggacttacat
1081 tcttttttgg gaggacggtg gggagacagg gagtggtaaa gggaaaaggt taaaaatcca
1141 cctgtggttg tatattcttc tattctgtca ctctgttacc tagactgtga gaggcttttg
1201 ccttcagtca gattaaaaag agcagggcct aacattgagt gatagcacct gctttgataa
1261 ataggttttc tcactcttct ttttttcctt cttttatccc tcactccctc ccctaaaccc
1321 tgcttcagca caatggacta attctagcat tctgatcata aggccctcca ttttcctaat
1381 gtgtttcaag gaatcttttt aggaaaaata tccagattat tcatccactt tttttagtat
1441 ctactaacaa ctcctttttt tctctagaga gttatgaagg aacaggttgt ccttgtctgg
1501 agtcaagcta aacacatgat ttgttttatc agcagctgga gcagaagttg aaaatgtctt
1561 tctgtgagac agtaatttgc tactgaagct ttatggcttg tttgcactga ttactccagg
1621 atccaaaaac ttggtgaaag tcactgaaac actcaaggca aattacttta cagccctgag
1681 tgtctgtcac catagtttgc ataatgaata tgaatcccat tggtgtgtgg tgtaggaaat
1741 cctgtagttg tattttcttg aactgaaata tttgactcaa aataattaag actcattgtc
1801 atttttcatc ttggcattat tgtggacaag ttgacatatt aaatctcttt gctttctggt
1861 aagcttagct tttaaaatgc attttccctt gtcctgtctt taactagata tacatgctta
1921 tatttatagt gggtttcaca gactataaaa ttgaatgtat gaaattttta tttatatcag
1981 tgcttttaat aatgaagata tttttggagt aatggtgctg tcttgtagcg agttattaat
2041 catagtaaga tttttttctc ttcatttgct ttttttgttt catattaaca attttttttt
2101 tacacggaca caaccctctg acagtctttc caaatattaa aatcatttga atatgtatgc
2161 tgtgatctga acactgctca agccatcaag cagtcttcat acagtttgca ttataaaatc
2221 tcattaaatt ctccaagaaa aaataagttg aagaatttta tttcctgacc atgcatcccc
2281 tggatttctg agtttcagtt cagattgtag atgacaatat aagctgcctt ccgaaattgt
2341 caacatctga atgttaagtc cattttcccc atggaagaag cccgtagttc catgaagtat
2401 ggattaccat ttgtattttt cactaacagt aaatgtattt ttcttattaa ttgtttgcct
2461 taggaatgat gaattacatt ttttgttcct tcttaccata aacatctgca ttgctcagct
2521 cagccttcct tgtatgttgt ttctttataa atggttgagc tgctgatgca ggtattgcca
2581 agctaacagt acaaatcatt ttaaagagga agctggcgcg tatggcagcc gaggagcaca
2641 ctctgcagga cactggacaa gacagtaaat attcaacttt taatgctgat taaaggagta
2701 taggtaaaga atacgtaggt atacataatt ggtgagacaa atattcactt tatttatatt
2761 ttatatatta tttttttaat ttggtaaata ctatccagtt ttgtagttgt ccttgttgat
2821 ttgtgtgata ttaaagtatt agtaataatt gccaggaaac tatcattagg gagggtttag
2881 ttggttgctg tttggactgg gagggatgat ttaaatttag tgctagaaac caattttagt
2941 gactgcacag tttatcattt gtcagacaga aggtagctat aaagctaccc tgtaagtcat
3001 atcaaaaaag ttcagaggaa gattagtaaa tatttatcaa taaaaataaa cattttgttt
3061 ttctaatatc ttaacatatc ctccccttta ggaggaagaa cgtgcaaaac gtgaggagct
3121 agagcgaata ctggaagaga ataaccgaaa aattgcagaa gcacaagcca aactggccga
3181 agaacagttg agaattgttg aagaacaaag aaagattcat gaggaaagga tgaaactaga
3241 acaagaacga caacgtcaac aaaaagaaga acaaaaaatt atcctgggca aggggaagtc
3301 caggccaaaa ctgtccttct cattaaaaac ccaggattaa attgcaaact ctgaactttt
3361 tacaaagaaa aatggaaaaa ctttgtatgg tagcttcatg ttgaagtggt tttttgtttt
3421 tgtttttgtt tttttaattt gtaaaatctg gaaagttagc ttgttctaat aggggctatg
3481 ctctgcaatt cccttttttt tttttttttt ccttccacta agtcaaatcc ttatcagatc
3541 attgttgtat tctaaggagt gacgtatttt tcacctgttt ggattctata ttagtggtct
3601 gaggaagagc agatcacatt gtaaaactat ggatggtctg ataaggcttt tactgacccc
3661 actgacttca gagttatact ctgtttgcta catcataatg ctggttttgc tgactttttg
3721 tttttttata tatttataaa aaaagaaaaa gttggtgatt gcattgggaa attcccaggg
3781 tattactgga cctatgtggt gtattgttaa accagtgtcc ttgtgatact gttgctcttg
3841 atgttcctga tacaggtaag gaaacagttg gtcaactctg atacaaagta tatatacagt
3901 tcagtattgt ctctgttcat tttgttttta tttcattgac aaaatcaaac cagcattccc
3961 cattgtgtaa ataaatgatt ttgctgaata aagtaaagtc ttaaattcaa aaaaaaaaaa
4021 aaaa
//