LOCUS BC071576 4887 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens amyotrophic lateral sclerosis 2 (juvenile), mRNA (cDNA clone MGC:87187 IMAGE:30347073), complete cds. ACCESSION BC071576 VERSION BC071576.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4887) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4887) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: o Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40316934. FEATURES Location/Qualifiers source 1..4887 /db_xref="H-InvDB:HIT000264405" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87187 IMAGE:30347073" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4887 /gene="ALS2" /gene_synonym="ALS2CR6" /gene_synonym="ALSJ" /gene_synonym="IAHSP" /gene_synonym="KIAA1563" /gene_synonym="PLSJ" /db_xref="GeneID:57679" /db_xref="MIM:606352" CDS 119..3832 /gene="ALS2" /gene_synonym="ALS2CR6" /gene_synonym="ALSJ" /gene_synonym="IAHSP" /gene_synonym="KIAA1563" /gene_synonym="PLSJ" /codon_start=1 /product="ALS2 protein" /protein_id="AAH71576.1" /db_xref="GeneID:57679" /db_xref="MIM:606352" /translation="MDSKKRSSTEAEGSKERGLVHIWQAGSFPITPERLPGWGGKTVL QAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFH SGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEE HTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ CLPSQDLKPVPERCNQCSQLLITMTDKEDHVIISDSHCCPLGVTLTESQAENHASTAL SPSTETLDRQEEVFENTLVANDQSVATELNAVSAQITSSDAMSSQQNVMGTTEISSAR NIPSYPDTQAVNEYLRKLSDHSVREDSEHGEKPVPSQPLLEEAIPNLHSPPTTSTSAL NSLVVSCASAVGVRVAATYEAGALSLKKVMNFYSTTPCETGAQAGSSAIGPEGLKDSR EEQVKQESMQGKKSSSLVDIREEETEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVV LTPTYSGEADALLPSLRIEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEA GGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKISSENGVWSIAAGRDYSLF LVDTEDFQPGLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLA LVDKNIMGYIASLHELATTERRFYSKLSDIKSQILRPLLSLENLGTTTTVQLLQEVAS RFSKLCYLIGQHGASLSSFLHGVKEARSLVILKHSSLFLDSYTEYCTSITNFLVMGGF QLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLPIRRLHNYAKVLLKLAT CFEVASPEYQKLQDSSSCYECLALHLGRKRKEAEYTLGFWKTFPGKMTDSLRKPERRL LCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLSEEAGGVN GLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGMSDLPPYGSGSSVQRQEPPI SRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGLEDGYGEYR IPNKAMNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSS SPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHL NKMMGNGVLLSEDDTIYEGEFSDDWTLSGKVGN" BASE COUNT 1345 a 1001 c 1140 g 1401 t ORIGIN 1 cactgggttg ccaagctcgc gccggatgcg gagcgcggtg ctgccggtgg agcttcaggt 61 cttgatagac tttctgtaaa gaaggaatga tttggtgatg gagtgttccc actgaccgat 121 ggactcaaag aagagaagct caacagaggc agaaggatcc aaggaaagag gcctggtcca 181 tatctggcag gcaggatcct ttcccataac accagagaga ttgccaggct ggggaggaaa 241 gactgttttg caggcagccc tcggagtgaa acatggagtt cttctgactg aagatggtga 301 ggtctacagc tttgggactc ttccctggag aagtggacca gtggagattt gtccaagtag 361 ccccattcta gaaaatgccc tggttgggca atatgttatt actgtggcaa caggaagctt 421 ccatagtgga gcagtgacag acaatggtgt cgcgtacatg tggggagaga attctgctgg 481 ccagtgtgca gtagccaacc agcagtatgt gccggaacca aatcctgtca gcattgctga 541 ttctgaggcc agccctttgt tagcagtcag gattttacag ttggcgtgtg gcgaggagca 601 cactctggca ttgtcaataa gcagagagat ttgggcatgg ggtaccggtt gtcagttggg 661 tctcattacc actgccttcc cagtgacaaa gccgcaaaag gtagaacatc ttgctgggcg 721 agtggtgctt caagttgcct gtggtgcttt ccacagctta gcccttgtac aatgcctccc 781 ttcccaggat ctgaagccag tcccagaacg atgcaaccag tgcagccagc tcttgattac 841 tatgactgac aaagaagacc atgtgattat atcagacagt cattgttgcc cattaggtgt 901 gacactgaca gaatctcagg cagaaaacca tgccagcact gctctcagcc cctccactga 961 aacccttgac aggcaggaag aagtatttga gaacactctt gtagcaaatg atcagtctgt 1021 tgctactgaa ctgaatgcag taagtgctca gatcacaagc agcgatgcca tgtcctctca 1081 acaaaatgtc atgggaacaa ctgaaatttc ctctgccaga aacataccat cataccctga 1141 cacccaagca gtcaatgaat acctacggaa actgtcagat cattcagtaa gagaggactc 1201 agagcatggt gaaaagccag tgccatctca gcctctttta gaagaagcaa ttcctaatct 1261 ccacagcccg cctaccacaa gcacctcagc cctaaacagc ctggtggtct cttgtgcatc 1321 tgctgttggt gtgagagtgg ctgctactta tgaagctggt gccttgtcac tgaagaaagt 1381 tatgaacttt tatagtacaa ccccttgtga aactggagct caggcaggca gtagtgccat 1441 tggccccgaa ggtttgaaag atagcaggga agaacaggtt aaacaggaat caatgcaagg 1501 aaagaaaagt tcaagtcttg tggatatcag agaagaagaa acagagggag gcagtcgaag 1561 actctccctc cctggattgt tgtcacaagt ttcccccagg ctcttaagaa aggctgcacg 1621 ggtgaaaacg aggacagtgg ttctgacccc cacatacagt ggagaagcag atgcgctcct 1681 gccttctctg agaatagaag tgtggacctg ggggaaaggg aaggaagggc agctggggca 1741 cggcgatgtt ctgcctaggc ttcaaccgtt gtgtgtaaaa tgtctggatg gcaaagaagt 1801 aatccatctg gaggcaggtg gttaccattc tcttgcactt actgcgaaat cccaggttta 1861 ctcatggggt agcaatacct ttggtcaact tgggcattcc gattttccaa caacagttcc 1921 tcgtcttgca aagataagca gtgaaaatgg agtctggagc atagctgcag gcagggatta 1981 ttccctgttt ttagtggata cagaagactt ccagcctggg ttatattaca gtggccgaca 2041 ggaccctaca gaaggtgaca accttccaga gaatcacagt ggttctaaga ctccagtact 2101 tctctcctgt agtaagcttg gatatataag cagagtgaca gcaggaaaag atagctattt 2161 agccttggtg gataaaaaca ttatggggta tattgccagt ctccacgagt tagctactac 2221 agaaagacga ttctattcaa aactaagtga tatcaaatct cagattctca ggcctcttct 2281 cagtttagaa aatttgggca ctacaactac agtccagctg ttgcaggagg tggctagccg 2341 attcagcaag ctgtgttacc tcattggtca gcatggagcc tcattgagca gcttccttca 2401 tggggtaaag gaagccagga gtttggtcat cctgaagcat tcaagtctct tcttggatag 2461 ttatacagag tattgcacat ctattacaaa tttcctggtt atgggaggat tccagcttct 2521 tgctaagcct gccattgatt tcctaaataa aaaccaagag ctgttgcaag atttgtcaga 2581 agtgaatgac gaaaacactc agttgatgga aatactgaat actttgtttt tcttgccaat 2641 cagacgactt cataattacg caaaagtttt gctaaagctt gctacttgtt ttgaagtggc 2701 atctccagaa tatcagaaac tgcaggattc cagttcttgt tatgagtgtc ttgctctcca 2761 tctcggcagg aaaaggaagg aagcagaata cacactgggc ttctggaaga ccttccccgg 2821 aaaaatgacg gattccttga ggaagccaga gcgtcgactg ctgtgtgaga gtagtaaccg 2881 agccctgtct ctgcagcatg ctgggaggtt ttccgtgaat tggttcattc tctttaatga 2941 tgccctggtc catgcccagt tctccacgca ccatgttttc cctctggcca cgctgtgggc 3001 agagccactg tctgaagaag ctggtggtgt gaatggctta aagataacta cacctgagga 3061 gcagttcact ctcatttcat ctacacccca ggaaaagaca aagtggctac gagctataag 3121 ccaagccgta gatcaggctt tgagagggat gtctgatctc cccccttatg gaagtggtag 3181 cagtgttcag agacaggagc cacccatttc acgcagtgcc aaatatactt tctacaagga 3241 tcctcgccta aaggatgcca cctatgatgg acgctggctt tcagggaagc ctcatggcag 3301 aggggttttg aagtggcctg atggaaagat gtattctggc atgttcagga atggcttgga 3361 agatgggtat ggagaataca gaatcccaaa caaggcaatg aacaaagaag accattatgt 3421 gggccattgg aaagaaggaa aaatgtgcgg tcaaggagtc tacagctatg cttctggtga 3481 agtatttgag ggctgttttc aagataatat gcgtcatggt catggtcttc tacgaagtgg 3541 gaaattgacg tcctcttctc ctagtatgtt cattggccag tgggtaatgg ataagaaagc 3601 aggatatggt gtctttgatg atatcactag gggggaaaag tatatgggaa tgtggcaaga 3661 tgatgtgtgt caagggaatg gtgtggtggt tacccagttt ggattatact acgagggcaa 3721 ctttcacctt aataaaatga tgggaaatgg ggttttgctt tccgaagatg atactatcta 3781 tgaaggagaa ttttcagatg actggactct tagtggaaag gttggaaact agctttcttt 3841 ttttttctcc ctaataaatt cttttactaa ttttttttta ctttaaaaat agctgattta 3901 catgccataa aattcacccc tttcaagtgc acatttcagt gatttttggt caacatggct 3961 gtacaaacca ccaccacaat ccagtttcag aacatttccg tctcccaaga aaatcccttc 4021 tgctcattca gtgacttcca tttccaccta aagtcccagc caaccactaa tcacccttaa 4081 tcactctata gatttgcctt ttttgggcct tttgtataaa tggaatcata catgcaatct 4141 cctctatgtg gcttcttaca cttagtataa tgtttttgtt ttttccatat tgtggcatgt 4201 atagtatttg ttccttttta tggctgaata gtattccaaa actacatttt gtttatcctt 4261 ttaccagttg atggacattg ggttatttcc aactttagac tattgtaaat aatgctgcta 4321 taaacttttg aatgcagttt cttgtgtaga catatgtttt cattttcatt tctcaagtag 4381 atgcctggag tgtaattgct aagttgtatg gtaaattgat gtttaacata ttaagaaact 4441 gtcgaacttt tttccaaagt gtctgtacca ttttacattc ccatcagcaa tgtctgagga 4501 tactaatttc tccatatcaa aaaatatttc ttattttctg tcttttttct tatagccatt 4561 ccaatgggta tgaagtggta tctcctggtt ttaatttgca ttccatagtg actaatgatg 4621 tagaacatgc ttattagtga ttcatatatc ttctttgatg aaatgtctat tcagatcttg 4681 gcctatttct aaaattttgt ttgtactctt gttgaattgt atgggttctt tctgtattct 4741 ggatacatgt cctttatcag atatgatttg taaatatttt cttgcagtct gacttgtctt 4801 ttattttctt aatagtgtct tttgaaatag aaaagttttt cattttaata aactctataa 4861 aaaattttat gaaaaaaaaa aaaaaaa //