LOCUS BC071575 4897 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens FUS interacting protein (serine/arginine-rich) 1, mRNA
(cDNA clone IMAGE:5275698), complete cds.
ACCESSION BC071575
VERSION BC071575.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4897)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4897)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: p Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16905515
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4897
/db_xref="H-InvDB:HIT000264404"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5275698"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4897
/gene="FUSIP1"
/gene_synonym="NSSR"
/gene_synonym="SRp38"
/gene_synonym="SRrp40"
/gene_synonym="TASR"
/gene_synonym="TASR1"
/gene_synonym="TASR2"
/db_xref="GeneID:10772"
/db_xref="MIM:605221"
CDS 73..282
/gene="FUSIP1"
/gene_synonym="NSSR"
/gene_synonym="SRp38"
/gene_synonym="SRrp40"
/gene_synonym="TASR"
/gene_synonym="TASR1"
/gene_synonym="TASR2"
/codon_start=1
/product="FUSIP1 protein"
/protein_id="AAH71575.1"
/db_xref="GeneID:10772"
/db_xref="MIM:605221"
/translation="MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLD
FYTRRPRGFAYVQYPFFRWLISEGC"
BASE COUNT 1476 a 907 c 1062 g 1452 t
ORIGIN
1 gaggctcggc cgcctgagcc gcggacggtt tgctgagccc gttagtgcgc ccggccgaga
61 cacgccgccg ccatgtcccg ctacctgcgt ccccccaaca cgtctctgtt cgtcaggaac
121 gtggccgacg acaccaggtc tgaagacttg cggcgtgaat ttggtcgtta tggtcctata
181 gttgatgtgt atgttccact tgatttctac actcgccgtc caagaggatt tgcttatgtt
241 caatatcctt tcttcagatg gctgattagt gaggggtgtt gaagtttgaa attcaagttt
301 atagaatgta aagctgtaca gttatggcga ccccaaagag aaagcatgaa agaaccttta
361 gagtagagtt caacacttaa ggcaagtaga caagccaaag acctcttaag gatcaggctt
421 gaagagaagg gagagtttgg gaaaagaaaa aataaagaaa agctggaaga aggacaagcc
481 taatgggaga caaagcctcg ctttatctac aaaaggggga aaaggttgtt tttcaaagtt
541 aaagataaag ccatctgtca tatttggcca agcatctcat gacaagtcct tctgacaagc
601 acttaaagag ttaaaggtca agatgaagtt gaatgatggc caagattaaa ggagtcatac
661 ctgatgtatc ctacagaata actatttttc tttttttttt tttttttaat gttttgtaag
721 cagttaattt tcaaaattat tctggtttgg tctagtgaca aaacctgtaa cttgatttat
781 gtgggccttt gatgttgtga ttgtggtctt gtgtaaatgc actctctctt atgaagttaa
841 agtgtaacag gatgtatatt cttaagatta aattcagcat attttggttt tggaccaggt
901 ggtcagatgc cacggagtag caggcagtgc tctttggagt agcgtggggt tctggggtta
961 agccacagag ccctgcttaa aggagagaca ggtgcatgca ctggggacta cttagaaaca
1021 gctctggtgg tcttgtaggg tcagaaccac tagaaatttt gtttatatat agattttaaa
1081 gtggttgctg gggacacata taaaccctta acttctttaa cttagccctg tgaagactgc
1141 tggccctgcg ctgctttagc acaatgatca gttggccctg aatgagttgc agaaggcctt
1201 ctccctggta taggtaccta actgggacct atgggagact ggtccctgac ccagagtttc
1261 aggtgacctt acttccgttc ctttcagtga gatcatctcc ctgcaacaag ggtttgggtt
1321 gtggacctca gactaggaaa agttcttcct gcttaaattc agtgagcctc aaacttttaa
1381 gttagtggag tcctagtgag acttagggaa aagccaaaaa ctactcctgc agggccagtg
1441 atcaaggaca gttgtgagaa ttggttgcaa agctccatta cagagaaaat aatagctata
1501 tctggcttag taaataaagg tagcagtgcg ttctggctta caacatagac ctcattttac
1561 ctagtgttgg gtggccgagg aatcaaggtc agtagtagtt tgattcaaga gtgtgtgata
1621 tttgaggcaa aaaaggctag taattcaaag caatctaaag gagaatgata attttaaaat
1681 acatattcag taagtctatg gttttaaaat agttgaaaag aaataagtaa caggcttatg
1741 aatttcattt ttgaaaagac cataaagtac aaatttctcc atgactgaca tcagagtgat
1801 actcggctgc ctctgctgct gctgtctctt ctgtctgact ccattcgcaa tagccttttc
1861 ttcctatccc tggcttaccg agtaaagtag aaacttgcca tcagcccagg attctgtttt
1921 cgagggtagc cccagagagg atgctctgtt ctcattaata atttttacag ctctcaatat
1981 aaatcctttt tatacttatt atattctgtc tcttggggta acaaagtagt gtacccatta
2041 agtgaacgta ttccttctaa ttagtttaga gcccagctgc attaaccttg agggatgttc
2101 agttacagta ttcaaggttc tgaactcccc atcagccttt cccttttcat gttgaaagcc
2161 cagttattta gaatttgtcc ttccatttaa tctgttcata atggcctcgg gaagacagag
2221 ctggaaacct gcagtcctta attcctttca gaacaaaaag tgggaagtct agtaaggcag
2281 accttttagt ctctataata aaagaatacc agtatcggtc tcaaaaaagg agtgtgtcac
2341 ttcagggata ttttaaatca cctctaaatc tgcagtcttg tgttgtctct caaatttagg
2401 aaaaagaaat gtgcaaacta gaatggggat ttttgggata gaatgaaaac ctatacctgt
2461 acctaaccta gctctctttc caaaccattt atatcaaaca ctgtcttgaa tgtgtacttg
2521 gcctctgtta aaatgatggt tttaggaaag gagctaggtt tggacagaat agctatataa
2581 agccagcagt tctcgtagta ttattgctga catgaccagg gaggacaagc agcttagctt
2641 ctcagatcaa aaacaagtac cagtagttcc tgcttaaggc tggtaaataa tatcttgaaa
2701 ttctcaagtt ggaaaccagt ctcaaaccca tttctttgca agaagttgta tatttagggt
2761 catggttagg gctttccagt ctaggagtcc ttccagtggt ctgtttcttg atagcatgct
2821 tttacagtct gcatggatgt aataacgctt ttggtatagt gattgtcttg agtactgctt
2881 gactctggtc ttgatgccca caaatggcta gcgtgcttgt cttcccatgc agtggaagga
2941 agacagttaa atgaaatagt agtattagat atatatgaaa aagaaaacag caaaataaat
3001 ttgaagttaa tgctttcgtc tcttgtaagg taaggcatat actgcttgct tacacaagaa
3061 ctattggcat tttctttttt tcgtttgaaa caaatatgaa aaatagtatt ttggttttaa
3121 gaaattttta ttttagcata caacatataa ctgacatttg ttttttcttt tttgtcttgt
3181 aaacttaatt cttaaaactt aggaaaattt ttggatagga caacttggtg attcagctat
3241 aacagatctt atttcaataa taactttact gcaatatgta ttcatacatt ttcaaatgtg
3301 tgccttagga aatcacaagt gcttttatag tgtgaagtgt taatggctga atccaactga
3361 atcaccaact agtaagtggg gttctggttg atgttctgga ataatattgg gagattgtga
3421 attgttccag acataccaac tgaactttca ttcattatca aagtttgcaa aacttcccaa
3481 gccccttaac atttagcaca tttgaggatg ttcgtgatgc tgaagacgct ttacataatt
3541 tggacagaaa gtggatttgt ggacggcaga ttgaaataca gtttgcccag ggggatcgaa
3601 agacaccaaa tcagatgaaa gccaaggaag ggaggaatgt gtacagttct tcacgctatg
3661 atgattatga cagatacaga cgttctagaa gccgaagtta tgaaaggagg agatcaagaa
3721 gtcggtcttt tgattacaac tatagaagat cgtatagtcc tagaaacagt agaccgactg
3781 gaagaccacg gcgtagcaga agccattccg acaatgatag attcaaacac cgaaatcgat
3841 ctttttcaag atctaaatcc aattcaagat cacggtccaa gtcccagccc aagaaagaaa
3901 tgaaggctaa atcacgttct aggtctgcat ctcacaccaa aactagaggc acctctaaaa
3961 cagattccaa aacacattat aagtctggct caagatatga aaaggaatca aggaaaaaag
4021 aaccacctag atccaaatct cagtcaagat cacagtctag gtctaggtca aaatctagat
4081 caaggtcttg gactagtcct aagtccagtg gccactgata gtataaacca tggtcatttt
4141 taggcatgta tcattcattt actcatagtt tggtttactt aaattatcag gaatacaatg
4201 ttgcaatgat gcttaaaaaa cacttgttag ttttccctgt accaggcaat ggttataatt
4261 aaaatgatat gctgttgaga agccactctt aagagtccag tttgtttaat gttatgggca
4321 gctaccaatt tgtggtgtct ctgtatattt ttgtaaagat tctcattttt tatgcttgaa
4381 gtatttggtg aaaagatgtt ggttgaccat aatttgcaac attgtctcat taaaaataaa
4441 ctttcatatt catatttggt agaactgtta acctagaaat gtagcttgct aataagatag
4501 aatgatacaa aagtgaagta gtagccacag tacaacactg actgctcaga cacatttagg
4561 ttcagggtgg acctttatgt cttgtcaaga tgtctaggcc cggctgggcg tggtggctca
4621 cacctgtaat cccagcactt tgggaggctg aggcgggcgg atcacgaggt caggagttcg
4681 agaccagcct gaccaacacg gtgaaacccc gtctctacta aaaatacaaa aattatccgg
4741 gcatggtggc acatgcctgt aatctcagct actcaggagg ctgaggcaag agaatcgctt
4801 gaacctggga ggtagaagtt gcagtgagcc aaaatcacgc cactgcactc cagcctgggc
4861 aacagagtga gactccgtcc caaaaaaaaa aaaaaaa
//