LOCUS BC071568 4707 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens DiGeorge syndrome critical region gene 8, mRNA (cDNA
clone IMAGE:30342289), with apparent retained intron.
ACCESSION BC071568
VERSION BC071568.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4707)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4707)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51093841
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4707
/db_xref="H-InvDB:HIT000264397"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30342289"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1127 a 1175 c 1332 g 1073 t
ORIGIN
1 atgtggccag cttgactaag ccgccagcgc acagcgcggc aggacgcgcc cgggtctcag
61 cggacttgtg catgttagct gtgtagattt atgtgagggc ttgtaaaact ctggtcttgt
121 aaactagtct taagcgcttt taatatggag acagatgaga gcccctctcc gctcccgtgt
181 gggcccgcag gagaagcggt gatggagagc cgagctcgcc ccttccaagc gctgccccgt
241 gagcagtctc caccacctcc cctgcaaacg tccagtggtg cagaggtaat ggacgttggc
301 tctggtggtg atggacagtc cgaactccct gctgaggacc ccttcaactt ctacggagct
361 tctcttctct ccaaaggatc cttctctaag ggccgcctcc tcatagaccc gaactgtagt
421 ggccacagcc cgcgcaccgc ccggcacgca cctgcggtcc ggaagttctc ccctgacctt
481 aagttgctta aggatgtaaa gattagcgtg agctttaccg agagctgcag gagtaaggac
541 aggaaggtgc tgtacacagg agcagagcgc gacgtgcggg cggagtgcgg tctgctcctt
601 agccctgtca gtggggacgt gcatgcttgt ccctttggcg ggagtgttgg tgacggggta
661 ggcatagggg gtgagagtgc tgataagaag gatgaggaga atgagctgga tcaggaaaag
721 agagtggagt atgcagtgct ctatgagtta gaagatttta ctgacaattt ggagctagat
781 gaagaaggag caggcgggtt cacggctaaa gcaatcgttc agagagacag agtagatgaa
841 gaggccttga atttccccta cgaggtatgt tggcagcccc tcctctagag ggctcttagc
901 aaaacccaaa gagagatttg ggaattgcag catcttttga aagcagggaa attaaaaaaa
961 aaaaaaacaa aaaccaaaat cccctctgag gtggaataat gttaatgtgg agaagagaaa
1021 gatgtaagga gtccagattt ttaaagtttc ctaatgaaaa gtttggccca tgggtaggcc
1081 ctgcatccct gatctagcgc gtggggcagc aggtgctgct gagttacgct ccttggcagt
1141 gtgtgcccct ggaccaggtg tgttggtgtc agctggtagc ttcatcctgt ttgtttttca
1201 gatgatcatg caccctaagg gcacatctag gctccctgat agcacctcct ttctgtgtct
1261 gttctcagga atgctgttga gctctcctgt tgcaggagca tgagcgccag gggctctggt
1321 gtctgaacag cgtgttttgc aggatgactt tgacaacgat gtggatgctc tgctggaaga
1381 aggcctttgt gcccccaaaa agaggcgaac agaggaaaaa tatggcggag acagcgacca
1441 tccgtccgat ggagagacaa gtgtgcagcc gatgatgacc aagattaaaa cagtgctcaa
1501 aagtcgtggc cgcccaccta cagagccgct gcccgacggg tggatcatga cattccataa
1561 ctctggagtc ccggtgtacc tacacagaga gtctcgggtg gtcacctggt ccaggccata
1621 cttcttggga acgggaagca tacggaaaca cgaccctcct ctgagtagca tcccttgtct
1681 gcattataag aaaatgaagg acaacgagga acgggagcaa agcagtgacc tcacccctag
1741 tggggatgtg tcccccgtca agcccctgag ccgatctgca gagctggagt ttcccctgga
1801 tgagcctgac tctatgggtg ctgacccggg gcccccggac gagaaagacc cactaggggc
1861 tgaggcagcc cctggggccc tggggcaggt gaaggccaaa gtcgaggtgt gcaaagatga
1921 atccgttgat ctcgaggaat ttcgaagcta cctggagaag cgttttgact ttgagcaagt
1981 tactgtgaaa aaattcagga cttgggctga gcggcggcaa ttcaatcggg aaatgaagcg
2041 gaagcaggcg gagtccgaga ggcccatctt gccagccaat cagaagctca ttactttatc
2101 agtgcaagat gcacccacaa agaaagagtt tgttattaac cccaacggga aatccgaggt
2161 ctgcatcctg cacgagtaca tgcagcgtgt cctcaaggtc cgccctgtct ataatttctt
2221 tgaatgtgag aacccaagtg agccttttgg tgcctcggtg accattgatg gtgtgactta
2281 cggatctgga actgcaagca gcaaaaaact tgcgaagaat aaagctgccc gagctacact
2341 ggaaatcctc atccctgact ttgttaaaca gacctctgaa gagaagccca aagacagtga
2401 agaactcgag tattttaacc acatcagcat cgaggactcg cgggtctacg agctgaccag
2461 caaggctggg ctgttgtctc catatcagat cctccacgag tgccttaaaa gaaaccatgg
2521 gatgggtgac acgtctatca agtttgaagt ggttcctggg aaaaaccaga agagtgaata
2581 cgtcatggcg tgtggcaagc acacagtaag aacaagagag ttggaaagca gttagcctca
2641 cagaagatcc ttcagctgct gcacccacat gtcaagaact gggggtcttt actgcgcatg
2701 tatggccgtg agagcagcaa gatggtcaag caggagacat cggacaagag tgtgattgag
2761 ctgcagcagt atgccaagaa gaacaagccc aacctgcaca tcctcagcaa gctccaagag
2821 gagatgaaga ggctagctga ggaaagggag gagactcgaa agaagcccaa gatgtccatt
2881 gtggcgtccg cccagcctgg cggtgagccc ctgtgcaccg tggacgtgtg agggaggtgg
2941 cacgggccag ggcgcggggg ccgccagccg cacttctgag gagaccagca gtcatgcatc
3001 gtgcaccaca gtgtcaggcc tccaacccac gctccttccc tgtggccaac ctgtgggccc
3061 ggccttaggg tggaggcttt agtgtacagg gacagccatg gccacacagc acacatgtgg
3121 agcagcggct ctccctggaa agctccaggc ctgaatggat ggactcagcg actgcaccag
3181 tggcagctgg tgactgtgga cagtggtgga ccctgcttct gtgcacctgc tgcaggctct
3241 ttttatgaag gctttcatga attttagtat gtaatacgca ctgacgacac atgatgcttg
3301 gatgacagat gagaggggat ggctgagtcc tgtggctggc ccgtgatgcc aggtggccca
3361 tgtgcccagg gcgcctgcag ggctgctaca gggacctggt caggaggtgc acatggtgcc
3421 ctgccctcac ccaccctctg tgtttcccct tctttgaaaa ggtagaagag aaaggaatat
3481 tttaaacctt tttggcttaa acagaatttt agcatcagaa ctagctttct gggattggag
3541 gcaaaccatc aaggtggtcc ctctccagtc tggacacgat gccagcaagg atgacgtcct
3601 gccacctcct ggagttaccc tggcctccta gggtcccttt ttctgatgaa gtcttaattc
3661 cctaaaagcg cctctttgga cactgaggcc ctctctgcct ttcctggcct ccggcaacag
3721 ttttttacaa agattttttg cagtcgagtc catatgtcca cccattgatt tttaaagctt
3781 ttgtgatatt ttagcatttt gaaagacttt cacagtgaga gtagaaggta gatttggaat
3841 catgcatttt agcaagtgga cttgttgaaa caggaagcaa gagccttcag tgtagcccat
3901 tcttgatcca gagctgttgc ctgtgacagc ggtttctctg gatgtcaaag gcagctgcct
3961 ggtgcccagc ttgcttctcg actggtggcc cctatgggtg ggtgtgcgat ggaaatgtgt
4021 tcctgccgga gtctgaggca ccagggtgtg ctcaaaggct ggccctggtg gtggactggc
4081 acctgtgcag agtgccgtgt gcttgtggtg cgccatctga agcaagagtc cagcgttctg
4141 ccgtgtctgt cccccaccat gccccctaca ggcggtactg atggcgcttt tttttttttt
4201 tttctgtcag gaaaacaatg ttggcctgtg ggccgcccac aacatatcct tccctcacta
4261 cctgtgtgac caaggttggc ttctgttgac ctttaaaaaa gaaaccctca actcaaattg
4321 ctataattag acacttgctt ctgtcttgcc tcctgtctgc agctgtgaat agtcatttga
4381 ctgtgactgt tgcccttagc cagccagatg cgcctgtgaa ccaaagcttc gtgcacatgt
4441 gttcccctaa aggttgggga gcctcgctgt gtcttgctgt tcccaggcac caccacagca
4501 ggtgctgcca tactcttgtg gtctctgtgc gccccccccc cccacccgtc tgccaagcat
4561 gggtatgaat cgtgcacaca gccatgcttc aaggccgggg caggggagcc tgtgctgatg
4621 ccatccaggg cactgggctg tgcctggaag gcgagccttg attgtctgaa cacataaagc
4681 aaactgtcca gaaaaaaaaa aaaaaaa
//