LOCUS BC071557 4238 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens PTK7 protein tyrosine kinase 7, mRNA (cDNA clone MGC:86962 IMAGE:30347652), complete cds. ACCESSION BC071557 VERSION BC071557.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4238) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4238) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: p Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27886608. FEATURES Location/Qualifiers source 1..4238 /db_xref="H-InvDB:HIT000264386" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:86962 IMAGE:30347652" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4238 /gene="PTK7" /gene_synonym="CCK4" /db_xref="GeneID:5754" /db_xref="HGNC:HGNC:9618" /db_xref="MIM:601890" CDS 176..3388 /gene="PTK7" /gene_synonym="CCK4" /codon_start=1 /product="PTK7 protein tyrosine kinase 7" /protein_id="AAH71557.1" /db_xref="GeneID:5754" /db_xref="HGNC:HGNC:9618" /db_xref="MIM:601890" /translation="MGAARGSPARPRRLPLLSVLLLPLLGGTQTAIVFIKQPSSQDAL QGRRALLRCEVEAPGPVHVYWLLDGAPVQDTERRFAQGSSLSFAAVDRPQDSGTFQCV ARDDVTGEEARSANASFNIKWIEAGPVVLKHPASEAEIQPQTQVTLRCHIDGHPRPTY QWFRDGTPLSDGQSNHTVSSKERNLTLRPAGPEHSGLYSCCAHSAFGQACSSQNFTLS IADESFARVVLAPQDVVVARYEEAMFHCQFSAQPPPSLQWLFEDETPITNRSRPPHLR RATVFANGSLLLTQVRPRNAGIYRCIGQGQRGPPIILEATLHLAEIEDMPLFEPRVFT AGSEERVTCLPPKGLPEPSVWWEHAGVRLPTHGRVYQKGHELVLANIAESDAGVYTCH AANLAGQRRQDVNITVATVPSWLKKPQDSQLEEGKPGYLDCLTQATPKPTVVWYRNQM LISEDSRFEVFKNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVLEKLKFTPPP QPQQCMEFDKEATVPCSATGREKPTIKWERADGSSLPEWVTDNAGTLHFARVTRDDAG NYTCIASNGPQGQIRAHVQLTVAVFITFKVEPERTTVYQGHTALLQCEAQGDPKPLIQ WKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTCIAGNSCNIKHTEAPLYVV DKPVPEESEGPGSPPPYKMIQTIGLSVGAAVAYIIAVLGLMFYCKKRCKAKRLQKQPE GEEPEMECLNGGPLQNGQPSAEIQEEVALTSLGSGPAATNKRHSTSDKMHFPRSSLQP ITTLGKSEFGEVFLAKAQGLEEGVAETLVLVKSLQSKDEQQQLDFRRELEMFGKLNHA NVVRLLGLCREAEPHYMVLEYVDLGDLKQFLRISKSKDEKLKSQPLSTKQKVALCTQV ALGMEHLSNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRW MSPEAILEGDFSTKSDVWAFGVLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPE GCPSKLYRLMQRCWALSPKDRPSFSEIASALGDSTVDSKP" BASE COUNT 854 a 1258 c 1275 g 851 t ORIGIN 1 actgggcgcg cgcggctccg gctcgggacg cctcgggacg cctcggggtc gggctccggc 61 tgcggctgct gctgcggcgc ccgcgctccg gtgcgctccg cctcctgtgc ccgccgcgga 121 gcgcagtctg cgcgcccgcc gtgcgccctc agctcctttt cctgagcccg ccgcgatggg 181 agctgcgcgg ggatccccgg ccagaccccg ccggttgcct ctgctcagcg tcctgctgct 241 gccgctgctg ggcggtaccc agacagccat tgtcttcatc aagcagccgt cctcccagga 301 tgcactgcag gggcgccggg cgctgcttcg ctgtgaggtt gaggctccgg gcccggtaca 361 tgtgtactgg ctgctcgatg gggcccctgt ccaggacacg gagcggcgtt tcgcccaggg 421 cagcagcctg agctttgcag ctgtggaccg gccgcaggac tctggcacct tccagtgtgt 481 ggctcgggat gatgtcactg gagaagaagc ccgcagtgcc aacgcctcct tcaacatcaa 541 atggattgag gcaggtcctg tggtcctgaa gcatccagcc tcggaagctg agatccagcc 601 acagacccag gtcacacttc gttgccacat tgatgggcac cctcggccca cctaccaatg 661 gttccgagat gggacccccc tttctgatgg tcagagcaac cacacagtca gcagcaagga 721 gcggaacctg acgctccggc cagctggtcc tgagcatagt gggctgtatt cctgctgcgc 781 ccacagtgct tttggccagg cttgcagcag ccagaacttc accttgagca ttgctgatga 841 aagctttgcc agggtggtgc tggcacccca ggacgtggta gtagcgaggt atgaggaggc 901 catgttccat tgccagttct cagcccagcc acccccgagc ctgcagtggc tctttgagga 961 tgagactccc atcactaacc gcagtcgccc cccacacctc cgcagagcca cagtgtttgc 1021 caacgggtct ctgctgctga cccaggtccg gccacgcaat gcagggatct accgctgcat 1081 tggccagggg cagaggggcc cacccatcat cctggaagcc acacttcacc tagcagagat 1141 tgaagacatg ccgctatttg agccacgggt gtttacagct ggcagcgagg agcgtgtgac 1201 ctgccttccc cccaagggtc tgccagagcc cagcgtgtgg tgggagcacg cgggagtccg 1261 gctgcccacc catggcaggg tctaccagaa gggccacgag ctggtgttgg ccaatattgc 1321 tgaaagtgat gctggtgtct acacctgcca cgcggccaac ctggctggtc agcggagaca 1381 ggatgtcaac atcactgtgg ccactgtgcc ctcctggctg aagaagcccc aagacagcca 1441 gctggaggag ggcaaacccg gctacttgga ttgcctgacc caggccacac caaaacctac 1501 agttgtctgg tacagaaacc agatgctcat ctcagaggac tcacggttcg aggtcttcaa 1561 gaatgggacc ttgcgcatca acagcgtgga ggtgtatgat gggacatggt accgttgtat 1621 gagcagcacc ccagccggca gcatcgaggc gcaagcccgt gtccaagtgc tggaaaagct 1681 caagttcaca ccaccacccc agccacagca gtgcatggag tttgacaagg aggccacggt 1741 gccctgttca gccacaggcc gagagaagcc cactattaag tgggaacggg cagatgggag 1801 cagcctccca gagtgggtga cagacaacgc tgggaccctg cattttgccc gggtgactcg 1861 agatgacgct ggcaactaca cttgcattgc ctccaacggg ccgcagggcc agattcgtgc 1921 ccatgtccag ctcactgtgg cagtttttat caccttcaaa gtggaaccag agcgtacgac 1981 tgtgtaccag ggccacacag ccctactgca gtgcgaggcc cagggggacc ccaagccgct 2041 gattcagtgg aaaggcaagg accgcatcct ggaccccacc aagctgggac ccaggatgca 2101 catcttccag aatggctccc tggtgatcca tgacgtggcc cctgaggact caggccgcta 2161 cacctgcatt gcaggcaaca gctgcaacat caagcacacg gaggcccccc tctatgtcgt 2221 ggacaagcct gtgccggagg agtcggaggg ccctggcagc cctcccccct acaagatgat 2281 ccagaccatt gggttgtcgg tgggtgccgc tgtggcctac atcattgccg tgctgggcct 2341 catgttctac tgcaagaagc gctgcaaagc caagcggctg cagaagcagc ccgagggcga 2401 ggagccagag atggaatgcc tcaacggtgg gcctttgcag aacgggcagc cctcagcaga 2461 gatccaagaa gaagtggcct tgaccagctt gggctccggc cccgcggcca ccaacaaacg 2521 ccacagcaca agtgataaga tgcacttccc acggtctagc ctgcagccca tcaccacgct 2581 ggggaagagt gagtttgggg aggtgttcct ggcaaaggct cagggcttgg aggagggagt 2641 ggcagagacc ctggtacttg tgaagagcct gcagagcaag gatgagcagc agcagctgga 2701 cttccggagg gagttggaga tgtttgggaa gctgaaccac gccaacgtgg tgcggctcct 2761 ggggctgtgc cgggaggctg agccccacta catggtgctg gaatatgtgg atctgggaga 2821 cctcaagcag ttcctgagga tttccaagag caaggatgaa aaattgaagt cacagcccct 2881 cagcaccaag cagaaggtgg ccctatgcac ccaggtagcc ctgggcatgg agcacctgtc 2941 caacaaccgc tttgtgcata aggacttggc tgcgcgtaac tgcctggtca gtgcccagag 3001 acaagtgaag gtgtctgccc tgggcctcag caaggatgtg tacaacagtg agtactacca 3061 cttccgccag gcctgggtgc cgctgcgctg gatgtccccc gaggccatcc tggagggtga 3121 cttctctacc aagtctgatg tctgggcctt cggtgtgctg atgtgggaag tgtttacaca 3181 tggagagatg ccccatggtg ggcaggcaga tgatgaagta ctggcagatt tgcaggctgg 3241 gaaggctaga cttcctcagc ccgagggctg cccttccaaa ctctatcggc tgatgcagcg 3301 ctgctgggcc ctcagcccca aggaccggcc ctccttcagt gagattgcca gcgccctggg 3361 agacagcacc gtggacagca agccgtgagg agggagcccg ctcaggatgg cctgggcagg 3421 ggaggacatc tctagaggga agctcacagc atgatgggca agatccctgt cctcctgggc 3481 cctgaggccc ctgccctagt gcaacaggca ttgctgaggt ctgagcaggg cctggccttt 3541 cctcctcttc ctcaccctca tcctttggga ggctgacttg gacccaaact gggcgactag 3601 ggctttgagc tgggcagttt tccctgccac ctcttcctct atcagggaca gtgtgggtgc 3661 cacaggtaac cccaatttct ggccttcaac ttctcccctt gaccgggtcc aactctgcca 3721 ctcatctgcc aactttgcct ggggagggct aggcttggga tgagctgggt ttgtggggag 3781 ttccttaata ttctcaagtt ctgggcacac agggttaatg agtctcttgg cccactggtc 3841 ccacttgggg gtctagacca ggattataga ggacacagca agtgagtcct ccccactctg 3901 ggcttgtgca cactgaccca gacccacgtc ttccccaccc ttctctcctt tcctcatcct 3961 aagtgcctgg cagatgaagg agttttcagg agcttttgac actatataaa ccgccctttt 4021 tgtatgcacc acgggcggct tttatatgta attgcagcgt ggggtgggtg ggcatgggag 4081 gtaggggtgg gccctggaga tgaggagggt gggccatcct taccccacac ttttattgtt 4141 gtcgtttttt gtttgttttg tttttttgtt tttgtttttg tttttacact cgctgctctc 4201 aataaataag ccttttttac ataaaaaaaa aaaaaaaa //