LOCUS BC070491 1165 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens alcohol dehydrogenase 5 (class III), chi polypeptide,
mRNA (cDNA clone MGC:87925 IMAGE:6164452), complete cds.
ACCESSION BC070491
VERSION BC070491.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1165)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11496890.
FEATURES Location/Qualifiers
source 1..1165
/db_xref="H-InvDB:HIT000264364"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87925 IMAGE:6164452"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1165
/gene="ADH5"
/gene_synonym="ADH-3"
/gene_synonym="ADHX"
/db_xref="GeneID:128"
/db_xref="HGNC:HGNC:253"
/db_xref="MIM:103710"
CDS 23..1147
/gene="ADH5"
/gene_synonym="ADH-3"
/gene_synonym="ADHX"
/codon_start=1
/product="alcohol dehydrogenase 5 (class III), chi
polypeptide"
/protein_id="AAH70491.2"
/db_xref="GeneID:128"
/db_xref="HGNC:HGNC:253"
/db_xref="MIM:103710"
/translation="MANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAV
CHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKF
CLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI
DPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASR
IIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR
AALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSE
YMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI"
BASE COUNT 327 a 218 c 312 g 308 t
ORIGIN
1 gcgccgacca gaatccgtga acatggcgaa cgaggttatc aagtgcaagg ctgcagttgc
61 ttgggaggct ggaaagcctc tctccataga ggagatagag gtggcacccc caaaggctca
121 tgaagttcga atcaagatca ttgccactgc ggtttgccac accgatgcct ataccctgag
181 tggagctgat cctgagggtt gttttccagt gatcttggga catgaaggtg ctggaattgt
241 ggaaagtgtt ggtgagggag ttactaagct gaaggcgggt gacactgtca tcccacttta
301 catcccacag tgtggagaat gcaaattttg tctaaatcct aaaactaacc tttgccagaa
361 gataagagtc actcaaggga aaggattaat gccagatggt accagcagat ttacttgcaa
421 aggaaagaca attttgcatt acatgggaac cagcacattt tctgaataca cagttgtggc
481 tgatatctct gttgctaaaa tagatccttt agcacctttg gataaagtct gccttctagg
541 ttgtggcatt tcaaccggtt atggtgctgc tgtgaacact gccaagttgg agcctggctc
601 tgtttgtgcc gtctttggtc tgggaggagt cggattggca gttatcatgg gctgtaaagt
661 ggctggtgct tcccggatca ttggtgtgga catcaataaa gataaatttg caagggccaa
721 agagtttgga gccactgaat gtattaaccc tcaggatttt agtaaaccca tccaggaagt
781 gctcattgag atgaccgatg gaggagtgga ctattccttt gaatgtattg gtaatgtgaa
841 ggtcatgaga gcagcacttg aggcatgtca caagggctgg ggcgtcagcg tcgtggttgg
901 agtagctgct tcaggtgaag aaattgccac tcgtccattc cagctggtaa caggtcgcac
961 atggaaaggc actgcctttg gaggatggaa gagtgtagaa agtgtcccaa agttggtgtc
1021 tgaatatatg tccaaaaaga taaaagttga tgaatttgtg actcacaatc tgtcttttga
1081 tgaaatcaac aaagcctttg aactgatgca ttctggaaag agcattcgaa ctgttgtaaa
1141 gatttaattc aaaaaaaaaa aaaaa
//