LOCUS BC070489 1051 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens alkB, alkylation repair homolog 2 (E. coli), mRNA
(cDNA clone MGC:90512 IMAGE:6048174), complete cds.
ACCESSION BC070489
VERSION BC070489.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1051)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1051)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: g Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48717225.
FEATURES Location/Qualifiers
source 1..1051
/db_xref="H-InvDB:HIT000264362"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90512 IMAGE:6048174"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1051
/gene="ALKBH2"
/gene_synonym="MGC90512"
/db_xref="GeneID:121642"
/db_xref="HGNC:HGNC:32487"
CDS 196..981
/gene="ALKBH2"
/gene_synonym="MGC90512"
/codon_start=1
/product="alkB, alkylation repair homolog 2 (E. coli)"
/protein_id="AAH70489.1"
/db_xref="GeneID:121642"
/db_xref="HGNC:HGNC:32487"
/translation="MDRFLVKGAQGGLLRKQEEQEPTGEEPAVLGGDKESTRKRPRRE
APGNGGHSAGPSWRHIRAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVF
GKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINR
YKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRLPL
AHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILLTKK"
BASE COUNT 300 a 247 c 293 g 211 t
ORIGIN
1 gcgggattcc gatctgcgcc ggagctgcga tgctagagca ctcttgccac ccccacccca
61 cggacgtgtt gcagtgatat cagaattttg cgtgcggttt acccgtgttt aacctctttg
121 cgtctcgctt ctgaatcgta tccacttgag catcactaga ctgatctatt ttaacactgg
181 tggggggcag cgaggatgga cagattcctg gtgaaagggg ctcaaggggg ccttttgagg
241 aagcaggagg agcaagagcc aactggagaa gagccagctg tgttgggagg agacaaagaa
301 agcacaagga agaggcccag gagagaggcc ccagggaatg gaggccactc agcaggccct
361 agctggcggc acattcgggc tgagggcctg gactgcagtt acacagtcct gtttggcaaa
421 gctgaggcag atgagatttt ccaagagttg gagaaagaag tagaatattt tacaggagca
481 ctggccagag tccaggtatt cgggaagtgg cacagtgtgc ccaggaagca ggcaacgtat
541 ggcgacgctg ggctgaccta cacattttca ggcctcacgc tgtctccaaa gccctggatc
601 ccagttctag agcgcatccg ggatcacgtc tctggggtga ctggacagac cttcaacttt
661 gtgctcatca acaggtataa agatggctgt gaccacatcg gggagcaccg agatgatgaa
721 agagaactgg cccctgggag ccccattgcc tctgtctcct tcggtgcctg cagagacttt
781 gtcttccggc ataaggattc ccgtgggaaa agcccctcca ggagggtggc ggtggtcagg
841 ctgccgctgg cccacgggag cttactaatg atgaaccacc cgaccaacac gcactggtac
901 cacagtcttc ccgtgagaaa gaaggttctg gctccacggg tgaatctgac ttttcgtaaa
961 attttgctta ctaaaaaata aaaacatttt taacagaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//