LOCUS BC070345 1601 bp mRNA linear HUM 25-JUN-2004 DEFINITION Homo sapiens T cell receptor alpha locus, mRNA (cDNA clone IMAGE:30418790), partial cds. ACCESSION BC070345 VERSION BC070345.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1601) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1601) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Narayan Bhat cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: p Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1601 /db_xref="H-InvDB:HIT000264300" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:30418790" /tissue_type="Blood, peripheral blood mononuclear cells (PBMC) cytoplasmic poly A RNA is pooled sample from 3 and 6 hr after stimulation with PMA and Ionomycin. These reagents are used to activate T- cells that results in lymphokine and cytokine production." /clone_lib="NIH_MGC_191" /lab_host="DH10B" /note="Vector: pDNR-LIB" BASE COUNT 496 a 379 c 341 g 385 t ORIGIN 1 gtgagaaacc cctatggctg ccagaggaga gaagagacaa cctgatgata gaagtaactc 61 ttataactgg aggttgcagg tcaatgactg atcttaattg ggaagaacaa ggatgacatc 121 cattcgagct gtatttatat tcctgtggct gcagctggac ttggtgaatg gagagaatgt 181 ggagcagcat ccttcaaccc tgagtgtcca ggagggagac agcgctgtta tcaagtgtac 241 ttattcagac agtgcctcaa actacttccc ttggtataag caagaacttg gaaaaagacc 301 tcagcttatt atagacattc gttcaaatgt gggcgaaaag aaagaccaac gaattgctgt 361 tacattgaac aagacagcca aacatttctc cctgcacatc acagagaccc aacctgaaga 421 ctcggctgtc tacttctgtg cagcaagtga atttcggcgg tagccagaaa acctcctacg 481 acaaggtgat atttgggcca gggacaagct tatcagtcat tccaaatatc cagaaccctg 541 accctgccgt gtaccagctg agagactcta aatccagtga caagtctgtc tgcctattca 601 ccgattttga ttctcaaaca aatgtgtcac aaagtaagga ttctgatgtg tatatcacag 661 acaaaactgt gctagacatg aggtctatgg acttcaagag caacagtgct gtggcctgga 721 gcaacaaatc tgactttgca tgtgcaaacg ccttcaacaa cagcattatt ccagaagaca 781 ccttcttccc cagcccagaa agttcctgtg atgtcaagct ggtcgagaaa agctttgaaa 841 cagatacgaa cctaaacttt caaaacctgt cagtgattgg gttccgaatc ctcctcctga 901 aagtggccgg gtttaatctg ctcatgacgc tgcggctgtg gtccagctga gatctgcaag 961 attgtaagac agcctgtgct ccctcgctcc ttcctctgca ttgcccctct tctccctctc 1021 caaacagagg gaactctcct acccccaagg aggtgaaagc tgctaccacc tctgtgcccc 1081 cccggcaatg ccaccaactg gatcctacac gaatttatga ttaagattgc tgaagagctg 1141 ccaaacactg ctgccacccc ctctgttccc ttattgctgc ttgtcactgc ctgacattca 1201 cggcagaggc aaggctgctg cagcctcccc tggctgtgca cattccctcc tgctccccag 1261 agactgcctc cgccatccca cagatgatgg atcttcagtg ggttctcttg ggctctaggt 1321 cccggagaat gttgtgaggg gtttattttt ttttaatagt gttcataaag aaagacatag 1381 tattcttctt ctcaagacgt ggggggaaat tatctcatta tcgaggccct gctatgctgt 1441 gtgtctgggc gtgttgtatg tcctgctgcc gatgccttca ttaaaatgat ttggaagagc 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //