LOCUS BC070337 1464 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens T cell receptor alpha locus, mRNA (cDNA clone
MGC:88342 IMAGE:30352166), complete cds.
ACCESSION BC070337
VERSION BC070337.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1464)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1464)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: o Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1464
/db_xref="H-InvDB:HIT000264292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88342 IMAGE:30352166"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1464
/gene="TRA@"
/gene_synonym="TCRA"
/gene_synonym="TRA"
/db_xref="GeneID:6955"
/db_xref="MIM:186880"
CDS 47..883
/gene="TRA@"
/gene_synonym="TCRA"
/gene_synonym="TRA"
/codon_start=1
/product="TRA@ protein"
/protein_id="AAH70337.1"
/db_xref="GeneID:6955"
/db_xref="MIM:186880"
/translation="MACPGFLWALVISTCLEFSMAQTVTQSQPEMSVQEAETVTLSCT
YDTSESDYYLFWYKQPPSRQMILVIRQEAYKQQNATENRFSVNFQKAAKSFSLKISDS
QLGDAAMYFCAYRSYLQGGSEKLVFGKGTKLTVNPYIQNPDPAVYQLRDSKSSDKSVC
LFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSI
IPEDTFFPSPESSCDVKLVEKSFETDTNLNFQNLSVIGFRILLLKVAGFNLLMTLRLW
SS"
BASE COUNT 385 a 377 c 331 g 371 t
ORIGIN
1 agatcagaag aggaggcttc tcaccctgca gcagggacct gtgagcatgg catgccctgg
61 cttcctgtgg gcacttgtga tctccacctg tcttgaattt agcatggctc agacagtcac
121 tcagtctcaa ccagagatgt ctgtgcagga ggcagagacc gtgaccctga gctgcacata
181 tgacaccagt gagagtgatt attatttatt ctggtacaag cagcctccca gcaggcagat
241 gattctcgtt attcgccaag aagcttataa gcaacagaat gcaacagaga atcgtttctc
301 tgtgaacttc cagaaagcag ccaaatcctt cagtctcaag atctcagact cacagctggg
361 ggatgccgcg atgtatttct gtgcttatag gagctatctt cagggcggat ctgaaaagct
421 ggtctttgga aagggaacga aactgacagt aaacccatat atccagaacc ctgaccctgc
481 cgtgtaccag ctgagagact ctaaatccag tgacaagtct gtctgcctat tcaccgattt
541 tgattctcaa acaaatgtgt cacaaagtaa ggattctgat gtgtatatca cagacaaaac
601 tgtgctagac atgaggtcta tggacttcaa gagcaacagt gctgtggcct ggagcaacaa
661 atctgacttt gcatgtgcaa acgccttcaa caacagcatt attccagaag acaccttctt
721 ccccagccca gaaagttcct gtgatgtcaa gctggtcgag aaaagctttg aaacagatac
781 gaacctaaac tttcaaaacc tgtcagtgat tgggttccga atcctcctcc tgaaagtggc
841 cgggtttaat ctgctcatga cgctgcggct gtggtccagc tgagatctgc aagattgtaa
901 gacagcctgt gctccctcgc tccttcctct gcattgcccc tcttctccct ctccaaacag
961 agggaactct cctaccccca aggaggtgaa agctgctacc acctctgtgc ccccccggca
1021 atgccaccaa ctggatccta cccgaattta tgattaagat tgctgaagag ctgccaaaca
1081 ctgctgccac cccctctgtt cccttattgc tgcttgtcac tgcctgacat tcacggcaga
1141 ggcaaggctg ctgcagcctc ccctggctgt gcacattccc tcctgctccc cagagactgc
1201 ctccgccatc ccacagatga tggatcttca gtgggttctc ttgggctcta ggtcccggag
1261 aatgttgtga ggggtttatt tttttttaat agtgttcata aagaaagaca tagtattctt
1321 cttctcaaga cgtgggggga aattatctca ttatcgaggc cctgctatgc tgtgtgtctg
1381 ggcgtgttgt atgtcctgct gccgatgcct tcattaaaat gatttggaag agcgaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaa
//