LOCUS BC070306 2014 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens semenogelin II, mRNA (cDNA clone MGC:88306
IMAGE:4356587), complete cds.
ACCESSION BC070306
VERSION BC070306.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2014)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2014)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38049015.
FEATURES Location/Qualifiers
source 1..2014
/db_xref="H-InvDB:HIT000264264"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88306 IMAGE:4356587"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2014
/gene="SEMG2"
/gene_synonym="SGII"
/db_xref="GeneID:6407"
/db_xref="HGNC:HGNC:10743"
/db_xref="MIM:182141"
CDS 18..1766
/gene="SEMG2"
/gene_synonym="SGII"
/codon_start=1
/product="semenogelin II"
/protein_id="AAH70306.1"
/db_xref="GeneID:6407"
/db_xref="HGNC:HGNC:10743"
/db_xref="MIM:182141"
/translation="MKSIILFVLSLLLILEKQAAVMGQKGGSKGQLPSGSSQFPHGKK
GQHYFGQKDQQHTKSKGSFSIQHTYHVDINDHDWTRKSQQYDLNALHKATKSKQHLGG
SQQLLNYKQEGRDHDKSKGHFHMIVIHHKGGQAHHGTQNPSQDQGNSPSGKGLSSQCS
NTEKRLWVHGLSKEQASASGAQKGRTQGGSQSSYVLQTEELVVNKQQRETKNSHQNKG
HYQNVVDVREEHSSKLQTSLHPAHQDRLQHGPKDIFTTQDELLVYNKNQHQTKNLNQD
QEHGRKAHKISYPSSRTEERQLHHGEKSVQKDVSKGSISIQTEEKIHGKSQNQVTIHS
QDQEHGHKENKISYQSSSTEERHLNCGEKGIQKGVSKGSISIQTEEQIHGKSQNQVRI
PSQAQEYGHKENKISYQSSSTEERRLNSGEKDVQKGVSKGSISIQTEEKIHGKSQNQV
TIPSQDQEHGHKENKMSYQSSSTEERRLNYGGKSTQKDVSQSSISFQIEKLVEGKSQI
QTPNPNQDQWSGQNAKGKSGQSADSKQDLLSHEQKGRYKQESSESHNIVITEHEVAQD
DHLTQQYNEDRNPIST"
BASE COUNT 797 a 424 c 372 g 421 t
ORIGIN
1 aagatttttc aagcaagatg aagtccatca tcctctttgt cctttccctg ctccttatct
61 tggagaagca agcagctgtg atgggacaaa aaggtggatc aaaaggccaa ttgccaagcg
121 gatcttccca atttccacat ggaaaaaagg gccagcacta ttttggacaa aaagaccaac
181 aacatactaa atccaaaggc agtttttcta ttcaacacac atatcatgta gacatcaatg
241 atcatgactg gacccgaaaa agtcagcagt atgatttgaa tgccctacat aaggcgacaa
301 aatcaaaaca acacctaggt ggaagtcaac aactgctcaa ttataaacaa gaaggcagag
361 accatgataa atcaaaaggt cattttcaca tgatagttat acatcataaa ggaggccaag
421 ctcatcatgg gacacaaaat ccttctcaag atcaggggaa tagcccatct ggaaagggat
481 tatccagtca atgttcaaac acagaaaaaa ggctatgggt tcatggacta agtaaagaac
541 aagcttcagc ctctggtgca caaaaaggta gaacacaagg tggatcccaa agcagttatg
601 ttctccaaac tgaagaacta gtagttaaca aacaacaacg tgagactaaa aattctcatc
661 aaaataaagg gcattaccaa aatgtggttg acgtgagaga ggaacattca agtaaactac
721 aaacttcact ccatcctgca catcaagaca gactccaaca tggacccaaa gacattttta
781 ctacccaaga tgagctccta gtatataaca agaatcaaca ccagacaaaa aatctcaatc
841 aagatcaaga gcatggccgg aaggcacata aaatatcata cccgtcttca cgtacagaag
901 aaagacaact tcaccatgga gaaaagagtg tacagaaaga tgtatccaaa ggcagcattt
961 ctatccaaac tgaagagaaa atacatggca agtctcaaaa ccaggtaaca attcatagtc
1021 aagatcaaga gcatggccat aaggaaaata aaatatcata ccaatcttca agtacagaag
1081 aaagacatct caactgtgga gaaaagggca tccagaaagg tgtatccaaa ggcagtattt
1141 cgatccaaac tgaagagcaa atacatggca agtctcaaaa ccaggtaaga attcctagtc
1201 aagctcaaga gtatggccat aaggaaaata aaatatcata ccaatcttcg agtacagaag
1261 aaagacgtct caacagtgga gaaaaggatg tacagaaagg tgtatccaaa ggcagtattt
1321 ctatccaaac tgaagagaaa atacatggca agtctcaaaa ccaggtaaca attcctagtc
1381 aagatcaaga gcatggccat aaggaaaata aaatgtcata ccaatcttca agtacagaag
1441 aaagacgact caactatgga ggaaagagca cgcagaaaga tgtatcccaa agcagtattt
1501 ctttccaaat tgaaaagcta gtagaaggca agtctcaaat ccagacacca aatcctaatc
1561 aagatcaatg gtctggccaa aatgcaaaag gaaagtctgg tcaatctgca gatagcaaac
1621 aagacctact cagtcatgaa caaaaaggca gatacaaaca ggaatccagt gagtcacata
1681 atattgtaat tactgagcat gaggttgccc aagatgatca tttgacacaa caatataatg
1741 aagacagaaa tccaatatct acatagccct gttgcttagc aaccacttga aaagctggac
1801 caatagcaag gtgtcacccg acctcagtga agtctttgat gtttctgaga ggcagactcc
1861 catgtggtcc cagatccttg gtccatggat gacaccacct tcccatgctt ccttgcatta
1921 ggctttctaa acccggagcc ccttcaaact tccaataaag ggatcatttt ctgctttaaa
1981 acccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//