LOCUS BC070277 1357 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HIG1 domain family, member 1A, mRNA (cDNA clone
MGC:88270 IMAGE:4686431), complete cds.
ACCESSION BC070277
VERSION BC070277.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: e Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661619.
FEATURES Location/Qualifiers
source 1..1357
/db_xref="H-InvDB:HIT000264235"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88270 IMAGE:4686431"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1357
/gene="HIGD1A"
/gene_synonym="DKFZP564K247"
/gene_synonym="HIG1"
/db_xref="GeneID:25994"
/db_xref="HGNC:HGNC:29527"
CDS 76..357
/gene="HIGD1A"
/gene_synonym="DKFZP564K247"
/gene_synonym="HIG1"
/codon_start=1
/product="HIG1 domain family, member 1A"
/protein_id="AAH70277.1"
/db_xref="GeneID:25994"
/db_xref="HGNC:HGNC:29527"
/translation="MSTDTGVSLPSYEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYG
LYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFWAKPKP"
BASE COUNT 431 a 214 c 273 g 439 t
ORIGIN
1 gcgcctgcag ggatcggaag ccggttgggg tgtgagaggt tttctcgctc tagggagatt
61 cttcaagcaa tcactatgtc aacagacaca ggtgtttccc ttccttcata tgaggaagat
121 cagggatcaa aactcattcg aaaagctaaa gaggcaccat tcgtacccgt tggaatagcg
181 ggttttgcag caattgttgc atatggatta tataaactga agagcagggg aaatactaaa
241 atgtccattc atctgatcca catgcgtgtg gcagcccaag gctttgttgt aggagcaatg
301 actgttggta tgggctattc catgtatcgg gaattctggg caaaacctaa gccttagaag
361 aagagatgct gtcttggtct tgttggagga gcttgcttta gttagatgtc ttattattaa
421 agttacctat tattgttgga aataaactaa tttgtatggg tttagatggt aacatggcat
481 tttgaatatt ggcttccttt cttgcaggct tgatttgctt ggtgaccgaa ttactagtga
541 ctagtttact aactaggtca ttcaaggaag tcaagttaac ttaaacatgt cacctaaatg
601 cacttgatgg tgttgaaatg tccaccttct taaattttta agatgaactt agttctaaag
661 aagataacag gccaatcctg aaggtactcc ctgtttgctg cagaatgtca gatattttgg
721 atgttgcata agagtcctat ttgccccagt taattcaact tttgtctgcc tgttttgtgg
781 actggctggc tctgttagaa ctctgtccaa aaagtgcatg gaatataact tgtaaagctt
841 cccacaattg acaatatata tgcatgtgtt taaaccaaat ccagaaagct taaacaatag
901 agctgcataa tagtatttat taaagaatca caactgtaaa catgagaata acttaaggat
961 tctagtttag ttttttgtaa ttgcaaatta tatttttgct gctgatatat tagaataatt
1021 tttaaatgtc atcttgaaat agaaatatgt attttaagca ctcacgcaaa ggtaaatgaa
1081 cacgttttaa atgtgtgtgt tgctaatttt ttccataaga attgtaaaca ttgaactgaa
1141 caaattacct ataatggatt tggttaatga cttatgagca agctggtttg gccagacagt
1201 atacccaaac ttttatataa tatacagaag gctatcacac ttgtgaaatt ctcttgtcta
1261 atctgaattt gcattccatg gtgttaacat ggtatatgta ttgttattaa agtaagtgac
1321 ccatgacaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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