LOCUS BC070270 1356 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 12 open reading frame 48, mRNA (cDNA clone
IMAGE:6714268), partial cds.
ACCESSION BC070270
VERSION BC070270.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1356)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1356)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923595.
FEATURES Location/Qualifiers
source 1..1356
/db_xref="H-InvDB:HIT000264228"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6714268"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1356
/gene="C12orf48"
/gene_synonym="FLJ20641"
/db_xref="GeneID:55010"
/db_xref="HGNC:HGNC:26074"
CDS 184..>1356
/gene="C12orf48"
/gene_synonym="FLJ20641"
/codon_start=1
/product="C12orf48 protein"
/protein_id="AAH70270.1"
/db_xref="GeneID:55010"
/db_xref="HGNC:HGNC:26074"
/translation="MLLALQLSMAENNKQHSGEFTVSLSDVLLTWKYLLHEKLNLPVE
NMDVTDHYEDVRKIYDDFLKNSNMLDLIDVYQKCRALTSNCENYNTVSPSQLLDFLSG
KQYAVGDETDLSIPTSPTSKYNRDNEKVQLLARKIIFSYLNLLVNSKNDLAVAYILNI
PDRGLGREAFTDLKHAAREKQMSIFLVATSFIRTIELGGKGYAPPPSDPLRTHVKGLS
NFINFIDKLDEILGEIPNPSIAGGQILSVIKMQLIKGQNSRDPFCKAIEEVAQDLDLR
IKNIINSQEGVVALSTTDISPARPKSHAINRGTAYCGRDTVKALLVLLDEEAANAPTK
NKAELLYDEENTIHHHGTSILTLFRSPTQVNNSIKPLRERICVSMQQKKKKKKKKKK"
BASE COUNT 452 a 248 c 279 g 377 t
ORIGIN
1 gcgcgggagg gcatcccgtt ggggatcctt ccgcacactg aagagtacgt cttcgggtct
61 acccctaatc acataatggc tgtgtttaat cagaagtctg tctcggatat gattaaagag
121 tttcgaaaaa attggcgtgc tctttgtaac tctgagagaa ctactctatg tggtgcagac
181 tccatgctct tggcattgca gctttctatg gcggagaaca acaaacagca cagtggagaa
241 tttacagtct ctctcagtga tgttttattg acatggaaat acttgctcca tgagaaattg
301 aacttaccag ttgaaaacat ggacgtgact gaccattatg aggacgttag gaagatttat
361 gatgatttct tgaagaacag taatatgtta gatctgattg atgtttatca aaaatgtagg
421 gctttgactt ctaattgtga aaattataac acagtatctc ctagtcaact actggatttt
481 ctgtctggca aacagtatgc agtaggtgat gaaactgatc tttctatacc aacatcacca
541 acaagtaaat acaaccgtga taatgaaaag gtgcagctgc tagcaaggaa aattatcttt
601 tcatatttaa atctgctagt gaattcaaag aatgacctgg ctgtggctta tattctcaat
661 attcctgata gaggactagg aagagaagcc ttcactgatt tgaaacatgc tgctcgagag
721 aaacaaatgt ctatcttttt ggtggccacg tcttttatta gaacaataga gcttggaggg
781 aaaggatatg caccaccacc atcagatcct ttaaggacac atgtaaaggg attgtctaat
841 tttattaatt tcattgacaa attagatgag attcttggag aaataccaaa cccaagcatt
901 gcagggggtc aaatactgtc agtgataaag atgcaactga ttaaaggcca aaacagcagg
961 gatccttttt gcaaagcaat agaggaagtt gctcaggatt tggatttgag gattaaaaat
1021 attatcaatt ctcaagaagg tgttgtagct cttagcacca ctgacatcag tcctgctcgg
1081 ccaaaatctc atgccataaa ccgtggtact gcatactgtg gcagagatac tgtgaaagcc
1141 ttattagttc ttttggacga agaagcagct aatgctccta ccaaaaacaa agcagagctt
1201 ttatatgatg aggaaaacac aatccatcat catggaacgt ctattcttac actttttagg
1261 tctcccacac aggtgaataa ttcgataaaa cccctaagag aacgcatctg tgtgtcaatg
1321 caacagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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