LOCUS BC070242 1445 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens survival of motor neuron 2, centromeric, mRNA (cDNA
clone MGC:88227 IMAGE:4673318), complete cds.
ACCESSION BC070242
VERSION BC070242.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13259515.
FEATURES Location/Qualifiers
source 1..1445
/db_xref="H-InvDB:HIT000264200_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88227 IMAGE:4673318"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1445
/gene="SMN2"
/gene_synonym="BCD541"
/gene_synonym="C-BCD541"
/gene_synonym="SMNC"
/db_xref="GeneID:6607"
/db_xref="HGNC:HGNC:11118"
/db_xref="MIM:601627"
CDS 10..858
/gene="SMN2"
/gene_synonym="BCD541"
/gene_synonym="C-BCD541"
/gene_synonym="SMNC"
/codon_start=1
/product="survival of motor neuron 2, centromeric"
/protein_id="AAH70242.1"
/db_xref="GeneID:6607"
/db_xref="HGNC:HGNC:11118"
/db_xref="MIM:601627"
/translation="MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYD
KAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIW
SEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENE
NESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPP
PPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGY
YMEMLA"
BASE COUNT 477 a 261 c 317 g 390 t
ORIGIN
1 gggtttgcta tggcgatgag cagcggcggc agtggtggcg gcgtcccgga gcaggaggat
61 tccgtgctgt tccggcgcgg cacaggccag agtgatgatt ctgacatttg ggatgataca
121 gcactgataa aagcatatga taaagctgtg gcttcattta agcatgctct aaagaatggt
181 gacatttgtg aaacttcggg taaaccaaaa accacaccta aaagaaaacc tgctaagaag
241 aataaaagcc aaaagaagaa tactgcagct tccttacaac agtggaaagt tggggacaaa
301 tgttctgcca tttggtcaga agacggttgc atttacccag ctaccattgc ttcaattgat
361 tttaagagag aaacctgtgt tgtggtttac actggatatg gaaatagaga ggagcaaaat
421 ctgtccgatc tactttcccc aatctgtgaa gtagctaata atatagaaca gaatgctcaa
481 gagaatgaaa atgaaagcca agtttcaaca gatgaaagtg agaactccag gtctcctgga
541 aataaatcag ataacatcaa gcccaaatct gctccatgga actcttttct ccctccacca
601 ccccccatgc cagggccaag actgggacca ggaaagccag gtctaaaatt caatggccca
661 ccaccgccac cgccaccacc accaccccac ttactatcat gctggctgcc tccatttcct
721 tctggaccac caataattcc cccaccacct cccatatgtc cagattctct tgatgatgct
781 gatgctttgg gaagtatgtt aatttcatgg tacatgagtg gctatcatac tggctattat
841 atggaaatgc tggcatagag cagcactaaa tgacaccact aaagaaacga tcagacagat
901 ctggaatgtg tagcgttata gaagataact ggcctcattt cttcaaaata tcaagtgttg
961 ggaaagaaaa aaggaagtgg aatgggtaac tcttcttgat taaaagttat gtaataacca
1021 aatgcaatgt gaaatatttt actggactct attttgaaaa accatctgta aaagactgag
1081 gtgggggtgg gaggccagca cggtggtgag gcagttgaga aaatttgaat gtggattaga
1141 ttttgaatga tattggataa ttattggtaa ttttatgagc tgtgagaagg gtgttgtagt
1201 ttataaaaga ctgtcttaat ttgcatactt aagcatttag gaatgaagtg ttagagtgtc
1261 ttaaaatgtt tcaaatggtt taacaaaatg tatgtgaggc gtatgtggca aaatgttaca
1321 gaatctaact ggtggacatg gctgttcatt gtactgtttt tttctatctt ctatatgttt
1381 aaaagtatat aataaaaata tttaattttt tttagaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaa
//