LOCUS BC070203 1904 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens collagen, type IV, alpha 6, mRNA (cDNA clone IMAGE:4274195), complete cds. ACCESSION BC070203 VERSION BC070203.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1904) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1904) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: b Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 16357502 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1904 /db_xref="H-InvDB:HIT000264161" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4274195" /tissue_type="Prostate" /clone_lib="NIH_MGC_83" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1904 /gene="COL4A6" /db_xref="GeneID:1288" /db_xref="MIM:303631" CDS 220..438 /gene="COL4A6" /codon_start=1 /product="COL4A6 protein" /protein_id="AAH70203.1" /db_xref="GeneID:1288" /db_xref="MIM:303631" /translation="MHPGLWLLLVTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPE KGARHNLQLLNDMAGRLYHFSEVLPNLF" BASE COUNT 580 a 362 c 440 g 522 t ORIGIN 1 gagtgctgca agttgtaacg ggcaccgctg agcctgtttc cctttggagc acttcttatc 61 tagaagcagt gtttagtttc ttccaaactg ggccacttcg tccacctact ctgttctgag 121 taaggaaaca gcctccaagc atcagcagag cccagatgag cacgggccgc ggagccgctt 181 agcagtctcc cgggacccag ctccggagga gccgcaagca tgcaccctgg gttgtggctg 241 ctcctggtta cgttgtgcct gaccgaggaa ctggcagcag cgggagagaa gtcttatgga 301 aagccatgtg ggggccagga ctgcagtggg agctgtcagt gttttcctga gaaaggagcg 361 agacacaact tgcagctact gaatgatatg gctggccggc tctaccattt cagtgaggtt 421 ctgcctaatc tcttttgatt ctaaggggta atgtggctca gccacagcaa ggaggctgag 481 ttctgatgtt ctctttcccc atacttctat ggaagactgg aagacagatt acttgcagtg 541 atttctggag gcagaagata agcaagtggc ctctatgatg gtagaaccaa gaaagaatga 601 tcattgccct taagccttca gagatgacag ctaaatccag agggaaaata aatagggata 661 agattgtaaa aaaagttgct gctggagaaa aaatagctgc tgctgataaa gaacctcaat 721 aaattcaaac aatgtctgcg tttggccctc aaatgtcatg ctggctcatt gctcgggaga 781 aagagccgta caactaccat gtcagaggag atgaggaagc aaagaagtct gactaagggc 841 actgccatgg atattcttgc ccctgctttg gaacaatcta tcattggatt gtggagagga 901 agcaaggagg cagctggcag tgtgacacca cgtgctatga ctcatgactg ttttgcctga 961 tggttggcaa catagtattg gcacagttgt gggctctaga gtacctgggc ctgaatctct 1021 attgatatgt gccatttggc aaatttctaa actctaagtc ttagctgtct catatacaaa 1081 atgggcataa tacatcctcc ctcatatggt tgttgtgagg attaataaaa cagtgtttat 1141 aaagtgcttg gcacagtgct gaacacatag cagtaaataa atattagtca ttattaatat 1201 tagctgatgc acatttgggg gcaatttcaa gaaagaattg attacaatag taaattcaga 1261 ctatggcatc tattgattgt tcctttttaa atgaaccatt ttaaatacag taaaaaccct 1321 cctccctggc ctctgcttaa cttcctttat ggagtaagtc gatgtttttc cttcctattg 1381 gaatatacac tggccaatgc tcagggcaca atggaagctc atgggcaggt aagttacttc 1441 tggtgaacac ttatatttct gcttccacac aacaagttga tcacttacca aaagttagct 1501 gtgtttttgc caagcccatt tatggcagtt gtactcgtta ttacaagtag gtaatttaat 1561 gtaaatttgt gaaatatgag tataaaaaga aaactgttat tttcatgaaa actaagttca 1621 atgctttgga aagacttact aaagaaaagt tgcttttgaa aactgccata ttgttaaaaa 1681 taaaacaaaa ctgaaagtgg aaatcaaatg tgatgcatta ggaatgtaac ttatgtgaaa 1741 aagagtctgt gaaatcccag ggtgtggcct cacgctcaaa gaaaaggcct tggccttaca 1801 acacatcacc agagtggtga atgaatgtac tttgtgtgtt ttaggttgaa ataaaatgtt 1861 ttatgtatgt atacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //