LOCUS BC070136 996 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens cytoskeleton associated protein 5, mRNA (cDNA clone
IMAGE:6463629), partial cds.
ACCESSION BC070136
VERSION BC070136.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 996)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 996)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: j Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307972.
FEATURES Location/Qualifiers
source 1..996
/db_xref="H-InvDB:HIT000264094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6463629"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>996
/gene="CKAP5"
/gene_synonym="ch-TOG"
/gene_synonym="KIAA0097"
/gene_synonym="TOG"
/db_xref="GeneID:9793"
CDS 97..>996
/gene="CKAP5"
/gene_synonym="ch-TOG"
/gene_synonym="KIAA0097"
/gene_synonym="TOG"
/codon_start=1
/product="CKAP5 protein"
/protein_id="AAH70136.1"
/db_xref="GeneID:9793"
/translation="MGDDSEWLKLPVDQKCEHKLWKARLSGYEEALKIFQKIKDEKSP
EWSKFLGLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTTGEVVSGVVSKVFNQPK
AKAKELGIEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKII
LLKPIIKVLPKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQNINSVQLKELEEEW
VKLPTSAPRPTRFLRSQQELEAKLEQQQSAGGDAEGGGDDGDEVPQIDAYELLEAVEI
LSKLPKDFYDKIEAKKKKKKKKKK"
BASE COUNT 351 a 168 c 242 g 235 t
ORIGIN
1 ggcggcccaa gcggtttcaa acggcttaga gcaggccgct tggttctgac ccagctgagg
61 aaatactctt aattctaagg aaaacctgga agcacaatgg gagatgacag tgagtggttg
121 aaactgccag ttgatcagaa atgtgaacac aagctgtgga aagcaaggtt aagtgggtat
181 gaagaggccc tgaagatctt ccagaaaata aaggatgaaa agagcccaga gtggtccaaa
241 tttttaggat tgatcaaaaa atttgtcact gattccaatg cagtggttca attgaaagga
301 ttagaagctg cacttgttta tgttgaaaat gcccatgtag caggaaaaac cacaggagaa
361 gttgtgtcag gtgttgtaag taaggtgttc aatcaaccta aagctaaagc caaggagctg
421 ggcatagaga tctgtcttat gtacatagag attgagaaag gagaggctgt tcaagaagag
481 ctcctgaaag gcttggacaa taagaatccc aagatcatag tggcctgtat agagacactg
541 aggaaagcct taagtgaatt tggttccaaa atcatcttgc ttaagccaat tatcaaagtg
601 ttgccaaaac tctttgagtc tcgagagaag gctgttcgag atgaagccaa actaattgct
661 gtggagattt acagatggat tcgggatgct ctgagacccc cattacaaaa tataaactct
721 gttcagttga aagaactaga agaagaatgg gtcaaactgc caacaagtgc tcctagacct
781 actcgatttc ttcgttccca acaagaacta gaagctaaat tggaacaaca acagtctgct
841 ggtggagatg ctgaaggagg tggtgatgat ggtgatgagg tgccacaaat agatgcttat
901 gagcttttag aagctgtaga aatcctttcc aaacttccca aagactttta tgacaaaatt
961 gaggcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//