LOCUS BC070112 2364 bp mRNA linear HUM 09-NOV-2006
DEFINITION Homo sapiens family with sequence similarity 53, member A, mRNA
(cDNA clone MGC:87650 IMAGE:5268061), complete cds.
ACCESSION BC070112
VERSION BC070112.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2364)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2364)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61966700.
FEATURES Location/Qualifiers
source 1..2364
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87650 IMAGE:5268061"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2364
/gene="FAM53A"
/gene_synonym="DNTNP"
/db_xref="GeneID:152877"
/db_xref="HGNC:HGNC:31860"
CDS 199..1395
/gene="FAM53A"
/gene_synonym="DNTNP"
/codon_start=1
/product="FAM53A protein"
/protein_id="AAH70112.1"
/db_xref="GeneID:152877"
/db_xref="HGNC:HGNC:31860"
/translation="MVTLITEKLQSQSLDDLTCKAEAGPLQYSAETLNKSGRLFPLEL
NDQSPWKVFSGGPPVRSQAATGPDFSFLPGLSAAAHTMGLQWQPQSPRPGAGLGAAST
VDPSESTGSSTAPPTKRHCRSLSEPEELVRCRSPWRPGSSKVWTPVSKRRCDSGGSAT
RQGSPGAVLPRSAVWSTGPTSPATPRPSSASGGFVDSSEGSAGSGPLWCSAESCLPST
RRRPSLSQERLAGAGTPLPWASSSPTSTPALGGRRGLLRCRSQPCVLSGKRSRRKRRR
EEDARWTRPSLDFLKMTQTLKNSKSLCSLNYEDDDEDDTPVKTVLSSPCDSRGLPGIT
MPGCSQRGLRTSPVHPNLWASRESVTSDGSRRSSGDPRDGDSVGEEGVFPRARWELDL
EQIENN"
BASE COUNT 394 a 738 c 797 g 435 t
ORIGIN
1 ggttcggtgg cgcgagaggc ggggagtcgc cgtggcacaa atcctgaaga gcccgtgggc
61 gtggactgct catctgtaaa gaaagtggag acatgacctt gagatttggc tgacccagca
121 atgctggggc cttcgcaagt ctgatgttcc aggactccag tgcctgttgg tgtggacgga
181 ggacacgggg ccccgaccat ggtcacactc atcactgaga agctgcagag ccagagcctg
241 gacgacctca cctgcaaggc ggaggctggc ccgttgcagt attctgcgga aaccctgaac
301 aagagcggtc gtctgttccc tttggagctc aacgaccaga gtccctggaa ggtcttcagt
361 ggaggaccgc ccgtcagaag ccaggcagcc acgggccctg atttctcctt cctgccgggc
421 ctgtctgctg ccgctcacac catgggtctt cagtggcagc cacagtcccc gcgcccaggc
481 gcaggcctgg gtgcagccag caccgtggac cccagtgaaa gcacaggctc gtccacggcc
541 ccaccgacca agcggcattg ccggtccttg tcagaacccg aggagcttgt gcgctgccgg
601 tccccctggc gccccggcag ctccaaggtc tggactccag tctccaagag gcggtgcgac
661 agcggcggga gtgccacgcg gcagggaagc cccggcgccg tcctgccgag gagtgctgtg
721 tggtcgaccg gtcccacctc gcccgccacg ccccggccgt cctccgccag cggcggcttc
781 gtggacagca gcgagggcag tgcgggctca ggcccgctct ggtgttccgc ggagtcctgc
841 ttgccctcca cgaggcgccg cccgtccctc tcacaggagc gactcgcggg tgcgggcact
901 cccctgccct gggccagcag cagccccacg tccacgcctg cgctgggcgg gcgccgtggg
961 ctgctccggt gccgctcaca gccttgcgtg ctcagtggga agaggagccg gcgcaaacgg
1021 aggcgtgagg aggacgccag gtggacacgc ccatccttgg acttcctgaa aatgacccag
1081 actttaaaaa attcaaaaag cctttgctcc ctcaattacg aagatgacga tgaggatgac
1141 accccagtga agacggttct gtcctcccca tgtgactccc ggggcctccc tggcatcacc
1201 atgcctggct gcagccagag gggcctcagg accagccctg tccaccccaa cctgtgggcc
1261 tctagggagt cggtgaccag tgatggctcc cgcaggagca gcggggaccc ccgtgatggg
1321 gacagtgtcg gggaggaggg cgtcttcccc cgggcccgct gggagctgga cctggagcag
1381 atcgagaaca actgaggctg gtgggggctg gtcggggcca tggctgccgc ctgcacctgc
1441 cctggggcac agagtaggtt tcctgtgagc tggtcggggc cacggcccgg cacctgccct
1501 ggggcacaga gtaggtttcc tgtgagctgg tcggggccac ggctgccgcc ggcacctgcc
1561 ctggggcaca gagtaggttt cctgtgagct ggtcggggcc acggctgcca ccggcacctg
1621 ccctggggca cagagtaggt ttcctgtgag ctggtcgggg ccacggctgc cgccggcacc
1681 tgccctgggg cacagagtag gtttcctgtg agctggtcgg ggccacggct gccgccggca
1741 cctgccctgg ggcacagagt aggtttcctg tgagctggtc ggggccacgg ctgccaccgg
1801 cacctgccct ggggcacaga gtaggtttcc tgtgagctgg tcggggccac ggctgccgcc
1861 tgcactgccc tggggcacag actaggtttc ctgtgagctg gtcggggcca tggctgctgc
1921 ctgcacctgc cccggggcac agagtaggtt tcctgtgagc tggtcggggc catggctgcc
1981 gcctgcacct gccccggggc acagagtagg tttcctgtgt gctggtcggg gccatggctg
2041 ccaccggcac ctgccctggg gcacagagta ggtttcctgt gagttggtcg gggccacggc
2101 tgccgcctgc actgccctgg ggcacagact aggtttcatg tgagctggtc ggggccatgg
2161 ctgccgccgg cacctgccct ggggcacaga gtaggtttcg tgttgcttgg aacattaagg
2221 cgtaattttg attcagtttt tcctaaagaa gcattttgca tttttatggc ttttgcagtt
2281 cgggagaaag cttctctatt ttggatgcat ttcagaaggg cgttctatta aacatgaatc
2341 tgcaaacaga aaaaaaaaaa aaaa
//