LOCUS BC070110 3869 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens chromosome X open reading frame 57, mRNA (cDNA clone MGC:87640 IMAGE:5264812), complete cds. ACCESSION BC070110 VERSION BC070110.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3869) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3869) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: k Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46195791. FEATURES Location/Qualifiers source 1..3869 /db_xref="H-InvDB:HIT000264068" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87640 IMAGE:5264812" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3869 /gene="CXorf57" /gene_synonym="FLJ10178" /gene_synonym="FLJ14191" /gene_synonym="RP11-647M7.1" /db_xref="GeneID:55086" /db_xref="HGNC:HGNC:25486" CDS 103..2670 /gene="CXorf57" /gene_synonym="FLJ10178" /gene_synonym="FLJ14191" /gene_synonym="RP11-647M7.1" /codon_start=1 /product="chromosome X open reading frame 57" /protein_id="AAH70110.1" /db_xref="GeneID:55086" /db_xref="HGNC:HGNC:25486" /translation="MSGESGQPEAGPSHAGLDWPNPERNRAGVPGGLIRRAGSQGPRS WIQKVLEQIMDSPRQCVTPSEVVPVTVLAVQRYLLEDEPRDTVPKPPLYCYDVTISDG VYQEKCYLDPSLNSLVYQNILKVGIQMRISRVSCLYNEKRIGQGILCIDNVHCGETSD SISLETPFRNRAHQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEEHNFSDTKI ISLSHLEMTWTNRRNFPALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSV IMWNALCPEWYKSLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICLNLRD PPTNIIIIPEKQVKPEWRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKK KENREDFWSYRWIHIADGTSEQPFIVELFSTSQPEIFENIYPMAYFVCTQLKVVRNDN QVPKLLYLTTTNESGVFITGHRGQPYTYDAKVKNFIQWIRTKSDSGEQKNMVIGGYYP YPPVPETFSKYSSSIKVESLLTAISEVRKEIEDLQYREQKRIAIQGIITAIKYIPHSS ATESASASETLRNANRPSTSQAARVEIQERNGKRHQDDEPVNSQYFQTTSTNLSLSNK IRILQGPHANPVAVPQPGASVQTKGIKPGMPSIFNRRANINANLQGKARKTISDRWES QLWREKKFGLIDHLHYSRVYPESIPRKFMFEHRKFLSDQYNSQPAKYVPPEGRPPKLD DFKSARSLGHFEVTILGLNHEIAIDVAFLPMYCPEDIRTSQIDTLLTSMNYSCAYPQD TTGNDRLPGPRAVAGDIIKAATELDRVHIVGILDICNLGNNKVEVYLHKIYSPENTS" BASE COUNT 1193 a 728 c 813 g 1135 t ORIGIN 1 gcagggtagc gatcgtcgcc aaagcgcgcg gttttatttc tctccacttt ggacggggca 61 aactagcttt tgggagtgaa gcgggtacgc agttatccaa caatgtctgg tgagtcagga 121 cagcctgagg ctggtccctc acatgcaggg ctagattggc cgaaccctga gaggaatcgg 181 gctggggtcc cgggagggtt gatccgaaga gctggttccc aagggcccag gtcctggatc 241 caaaaggttc ttgagcagat tatggactca cctcgccagt gtgtcacccc ctcggaggtg 301 gtgcctgtaa ctgtgctggc cgtccagagg tacctgttag aggatgagcc acgcgacacg 361 gtgcccaagc ctccccttta ttgctatgat gtgacgatct cagatggggt gtaccaggag 421 aagtgctacc tggaccccag cttgaactct ctcgtatatc aaaatattct taaagttggc 481 attcaaatga gaatttccag ggtctcatgt ctttacaatg agaaaaggat aggccagggg 541 atcctgtgca tagataacgt ccactgtggg gagacttcag acagtatttc tttagaaact 601 cccttcagaa atagagcgca ccaggagaaa ccagagaggc ctttaagagg cgggaagagt 661 cattacctgg cgctgtggaa taacgaagat ccctatggag atatctggtt aacagacaag 721 caacctgagg aacacaactt tagcgatacc aaaataattt cactttctca tcttgaaatg 781 acctggacta acagaagaaa ttttcctgca ttgcttgtga ggatcttaca taaatcaaaa 841 ctgcgatact atggaaaacc tgataaaaag atgattgaac catatcagac ctttttggaa 901 gttgctgaca gttcaggcac agtgtcagtg attatgtgga atgccctgtg tcctgagtgg 961 tataaaagtt tgcgggttgg tttagttctt ctgcttcaag actattctgt taaaaagagt 1021 tatccattca gaatacagcc tgtccccgtg gatccacaga tcaaactaat ttctacaatg 1081 gaaatctgcc tgaatcttcg agatccccca acaaatataa ttatcattcc agaaaagcag 1141 gtgaaaccag aatggagact gccaaagcta aatcaccgat ttaccacaag gtcagaactg 1201 gatgatatgc cagaaaattg catctgtgat gttattggcc ttttagtttt tgtaggaagg 1261 gtccagcggt caaaaaagaa agaaaaccgt gaagattttt ggtcatatcg ctggattcac 1321 attgctgacg gtacttcaga acaaccattt atagtggaac tgttttcaac atcgcagcca 1381 gaaatctttg aaaatattta cccaatggca tattttgtgt gtacacagtt gaaagttgtc 1441 agaaatgaca atcaagtacc taagctgctt tacctcacca ctacaaatga gagtggagtg 1501 tttattactg gtcatagagg ccagccgtat acgtatgatg ccaaggtaaa aaactttatt 1561 caatggatta gaacaaagtc tgattccggg gaacagaaga atatggttat tggtggatat 1621 tacccctatc caccagtgcc agagacattt tccaagtata gtagttctat taaagttgag 1681 tcgctcttga cagctataag tgaagtcagg aaggagattg aagacttgca gtatagggaa 1741 caaaagcgca ttgcaattca ggggataatt actgctataa agtatatccc ccatagcagt 1801 gcgactgaaa gtgcctcagc atcagaaaca cttcggaatg ctaacagacc ctcgacctct 1861 caagcagcta gagtagaaat tcaagaaaga aatggtaaac ggcatcaaga tgatgagcct 1921 gtgaattctc agtatttcca aactacatct acaaatttaa gtctgagcaa taaaataaga 1981 attcttcaag gcccacacgc taatccagtt gctgtacctc aaccaggagc ttctgtacaa 2041 acaaagggaa ttaaaccggg catgccaagc atcttcaacc gtcgagcaaa tataaatgct 2101 aatctgcaag ggaaagccag aaaaactata agtgataggt gggagagtca gctgtggaga 2161 gagaaaaagt ttggcttaat agatcaccta cactacagcc gtgtttatcc tgaaagtatt 2221 ccacggaaat ttatgtttga acacagaaag tttcttagtg accagtataa ttctcagcct 2281 gcgaaatatg taccaccaga aggaaggccc ccaaaacttg atgattttaa gagcgcccga 2341 agccttggac attttgaagt aaccatacta ggtctgaacc atgagatagc aatcgatgtt 2401 gctttcctac ccatgtattg tccagaagat attcgaacat ctcaaataga cacactgttg 2461 acctccatga attacagctg tgcatatcca caggacacaa ctggaaatga ccgattgcca 2521 ggtccaagag cggttgcagg tgatattata aaagcagcaa ctgaactgga tagagtgcat 2581 atcgtcggta tcttggatat ctgtaatttg ggtaataata aagtggaagt ctatttgcac 2641 aagatttata gtccagagaa tacttcttaa aagttagcaa atgaaattat tacagattat 2701 acgagtgtac tgctttaaag atattccatc attttgctgg taatttcagt aactgttttc 2761 agcaagaata ttacatgagc tctaaagtta ttaagcagtt ttatgttcgt tttgtgttta 2821 gggagctttt taaaacactt catttcagat tcattattga aaaggtcatc aaaataattt 2881 ttgtgtataa gggaatttac cttgcttacc ttactagtat gactattatc ttgacttctg 2941 gtaatttatg ttcactattc catttgtgaa gtgtactttc attctaaagc ctcagtataa 3001 ggcatcctaa cttacaagag taactttcca tggacattta acatccttcc aattttattc 3061 acatataatg ggaaattttg aattgccagt ttgaagactg ttctcctaaa gtgttcaacc 3121 tgcacttctt acaaccaagg tagtttgtat cattttcaaa agtacacatt attagggtct 3181 agttgcccct ggtccttagc ttgctcagct gcaaaataag cgtgctaaat taaattgtct 3241 taaggttttt ccacttcatt ttgtgacttt gtgtggttcg aatttctcag tattttaacc 3301 agtgtgttga tgttaaagtc aaaggctgca gtatgtctat attcttgctg tactcattgg 3361 tagtttcagt atatgtaatg tgagtttaaa tagtgaaatt gtatctcata ttaacatttc 3421 aaatgctcat attgaaaatg gaaaatagta aacacgggaa ttgattttat tctggttgtc 3481 tataatactt cattttaaat gtaaatggcc actctgcatt tgcaaggccc ggtggttgac 3541 atctgtgtgg tttgttagat gagacaaaat gaccattaaa tgagtttata gattattctg 3601 tatcaagata aatctgattc cagttaagct ataaacttgt gggattttct tgtagcccta 3661 tagttctgtg acttcatttg ctatacgctt taaatgtgtt gagcagccta tgaacctaaa 3721 gacatactgc agtttgttca taaatgtatt cagtctttta ttctttataa ttgtgtgtaa 3781 atgttaacta aacagtggat tcctctcgtg ttacagtttt gagtgaatta ttaaagaagt 3841 taaaatgcaa taacaaaaaa aaaaaaaaa //