LOCUS BC070086 2923 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 2, mRNA (cDNA
clone MGC:87441 IMAGE:5296371), complete cds.
ACCESSION BC070086
VERSION BC070086.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2923)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2923)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47271442.
FEATURES Location/Qualifiers
source 1..2923
/db_xref="H-InvDB:HIT000264044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87441 IMAGE:5296371"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2923
/gene="SFRS2"
/gene_synonym="PR264"
/gene_synonym="SC-35"
/gene_synonym="SC35"
/gene_synonym="SRp30b"
/db_xref="GeneID:6427"
/db_xref="HGNC:HGNC:10783"
/db_xref="MIM:600813"
CDS 172..837
/gene="SFRS2"
/gene_synonym="PR264"
/gene_synonym="SC-35"
/gene_synonym="SC35"
/gene_synonym="SRp30b"
/codon_start=1
/product="splicing factor, arginine/serine-rich 2"
/protein_id="AAH70086.1"
/db_xref="GeneID:6427"
/db_xref="HGNC:HGNC:10783"
/db_xref="MIM:600813"
/translation="MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVY
IPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSR
RGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRST
SKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEGA
VSS"
BASE COUNT 754 a 636 c 678 g 855 t
ORIGIN
1 ggttgttact taggtgcgct agcctgcgga gcccgtccgt gctgttctgc ggcaaggcct
61 ttcccagtgt ccccacgcgg aaggcaactg cctgagaggc gcggcgtcgc accgcccaga
121 gctgaggaag ccggcgccag ttcgcggggc tccgggccgc cactcagagc tatgagctac
181 ggccgccccc ctcccgatgt ggagggtatg acctccctca aggtggacaa cctgacctac
241 cgcacctcgc ccgacacgct gaggcgcgtc ttcgagaagt acgggcgcgt cggcgacgtg
301 tacatcccgc gggatcgcta caccaaggag tcccgcggct tcgccttcgt tcgctttcac
361 gacaagcgcg acgctgagga cgctatggat gccatggacg gggccgtgct ggacggccgc
421 gagctgcggg tgcaaatggc gcgctacggc cgccccccgg actcacacca cagccgccgg
481 ggaccgccac cccgcaggta cgggggcggt ggctacggac gccggagccg cagccctagg
541 cggcgtcgcc gcagccgatc ccggagtcgg agccgttcca ggtctcgcag ccgatctcgc
601 tacagccgct cgaagtctcg gtcccgcact cgttctcgat ctcggtcgac ctccaagtcc
661 agatccgcac gaaggtccaa gtccaagtcc tcgtcggtct ccagatctcg ttcgcggtcc
721 aggtcccggt ctcggtccag gagtcctccc ccagtgtcca agagggaatc caaatccagg
781 tcgcgatcga agagtccccc caagtctcct gaagaggaag gagcggtgtc ctcttaagaa
841 aatggtaatg tctgggaatc cgagacacat aaccctaatt cataaatggg atttggggta
901 ggtctttttg agtcgtgtta atgtaagaat gactcctatc attaggagtg ctgctcggag
961 gttactcacc tttgggagta atactgaaga gaggggtctg cagaaaggat gtgtatgaag
1021 cttagataat aatggctgtt tcgtaaactg tttgagacct attaatgaaa atgactattt
1081 cttgctgttt ttatccaacg tctgcatttt ccccctttaa agctgcggtc tcctgtttga
1141 taaaagaata ttggccagta ttgcagattt taactgattt ggctgatcct ccagggacca
1201 gtttctgtgg gcgtgtattg gagcaggttt gtctttaaat gttaaagatg cactatcctc
1261 ttagagaaac aatcagttca actattgttg tactgactgg gacttcatat tctaatggat
1321 gtggcaaaag aattgcaata agaagcagtg aacatttgga accccaaaag aaagttacag
1381 gtattgcact gggtggggaa aggatagtgt gtctttaact cttaaattgt ttggtcctat
1441 tttttaaaaa ggaaagggcc ctaagtagct cagatattaa agtagtattc tcaattacca
1501 aatgtttcat ttgaaacaat ttatcttaat gaaatataga ccaattctct gatctcgagt
1561 tgtttttgtt tggatacagc cctttttttt ttcttttttt ttcttcccct tacctttctt
1621 caccttggtt atttggccag gaatacgtaa attcaaactt gtacatgctg atggtagcct
1681 ttgtgaaatt ttcctaattg ggccttttaa aaacatggct gggtggaaca tttctgtacc
1741 ctactggttt gaccagagcc ttagtaagta cgtgcctgaa actgaaacca tgtgcacttt
1801 aatggaaggt aagctgaact tctttctttt caaacctaga tgtatcggca agcagtgtaa
1861 acggaggact tggggaaaaa ggaccacata gtccatcgaa gaagagtcct tggaacaagc
1921 aactggctat tgaaaaggtt attttgtaac atttgtctaa ctttttactt gtttaagctt
1981 tgcctcagtt ggcaaacttc attttatgtg ccattttgtt gctgttattc aaatttcttg
2041 taatttagtg aggtgaacga cttcagattt cattattgga tttggatatt tgaggtaaaa
2101 tttcattttg ttatatagtg ctgacttttt ttgtttgaaa ttaaacagat tggtaaccta
2161 atttgtggcc tcctgacttt taaggaaaac gtgtgcagcc attacacaca gcctaaagct
2221 gtcaagagat tgactcggca ttgccttcat tccttaaaat taaaaaccta caaaagttgg
2281 tgtaaatttg tatatgttat ttacattcag atctaaatgg taatctgaac ccaaatttgt
2341 ataaagactt ttcaggtgaa aagacttgat tttttgaaag gattgtttat caaacacaat
2401 tctaatctct tctcttatgt atttttgtgc actaggcgca gttgtgtagc agttgagtaa
2461 tgctggttag ctgttaaggt ggcgtgttgc agtgcagagt gcttggctgt ttcctgtttt
2521 ctcccgattg ctcctgtgta aagatgcctt gtcgtgcaga aacaaatggc tgtccagttt
2581 attaaaatgc ctgacaactg cacttccagt cacccgggcc ttgcatataa ataacggagc
2641 atacagtgag cacatctagc tgatgataaa tacacctttt tttccctctt ccccctaaaa
2701 atggtaaatc tgatcatatc tacatgtatg aacttaacat ggaaaatgtt aaggaagcaa
2761 atggttgtaa ctttgtaagt acttataaca tggtgtatct ttttgcttat gaatattctg
2821 tattataacc attgtttctg tagtttaatt aaaacatttt cttggtgtta gcttttctca
2881 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//