LOCUS BC070071 4727 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens RNA binding motif protein 16, mRNA (cDNA clone MGC:87340 IMAGE:4374384), complete cds. ACCESSION BC070071 VERSION BC070071.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4727) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4727) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: a Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47604915. FEATURES Location/Qualifiers source 1..4727 /db_xref="H-InvDB:HIT000264029" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87340 IMAGE:4374384" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4727 /gene="RBM16" /gene_synonym="KIAA1116" /db_xref="GeneID:22828" CDS 233..4048 /gene="RBM16" /gene_synonym="KIAA1116" /codon_start=1 /product="RBM16 protein" /protein_id="AAH70071.1" /db_xref="GeneID:22828" /translation="MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVV QSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRC PGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGT PVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQ PSILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHS EEPKKEIPASQLSHVSESVNISIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQ EGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAK KVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSER RAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINM IPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDL GVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKE TVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRAS FNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGG SVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAI LGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILG IQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIP NQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPP GDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRP PPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLGRRDHFGFN PEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRGFGQEVH RDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFEGATS QRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESEPV VESTETEGT" BASE COUNT 1429 a 1039 c 1045 g 1214 t ORIGIN 1 gcggatcccc gaactgcgcg gcccgactcg agtccgccat attggatgcc gcagccgctg 61 ctgccagcgc ttcctcctct gtcttcgccg agcggggctg gttcctgcgg cccgagcggc 121 ggggagcgcc ccctcctcgc ggccacgcag cagcccgcgt ctcgctctcc ccacccagtg 181 cagtggccgc cgcctcttcc gccgccgggc tcggggcctc cgcagcgaca acatggaggc 241 cgtgaagacc ttcaatagcg agttgtattc cctgaatgac tataaaccac ccatttcgaa 301 agcgaaaatg acccaaatta ctaaggcagc catcaaagct attaagttct ataaacatgt 361 ggtacagagt gttgagaagt ttattcagaa atgtaaacca gaatacaaag tacctggact 421 ttatgttatt gactccattg tgcgacaatc ccgacatcag tttggtcaag aaaaggatgt 481 gtttgcaccc agatttagta ataacatcat tagcactttc cagaatttat atcgttgccc 541 tggggatgac aagagtaaaa tagtgagagt actaaactta tggcagaaga ataatgtatt 601 taagagtgag attattcagc cccttttgga tatggcagcc gggattccgc ctccagttgt 661 cacacctgtt ttggccagca ctaccactgc tatgagcaat actccaggaa ctcctgtgac 721 acctgttact ccggccaatg tggtccaagg cttacctgat ccgtgggtat ctcagataac 781 aaatacagat acacttgcgg ctgtagctca gatcttgcaa agtcctcaag gccagcagct 841 tcaacaatta atacaaacct tacagataca acaacagaag ccccagcctt ccattctgca 901 ggccctagat gctggtcttg ttgttcagtt gcaagctctt acggcacaac ttacagctgc 961 agctgcagct gccaacactc ttactccctt agaacaggga gtctccttta acaagaagtt 1021 gatggatagg tttgattttg gggaagactc tgagcatagt gaagaaccca aaaaggaaat 1081 tccagcttca caactttctc acgtttcaga atctgtgaac atttccattt ttcatcagat 1141 agcagaacaa ctacaacagc aaaacctaga acatctcaga cagcagctct tggagcagca 1201 acagcctcaa aaggccactc ctcaggatag tcaggaagga acctttgggt cagagcattc 1261 agcgtcacca tcacaaggga gtagtcagca gcattttctt gaacctgaag tcaatttgga 1321 tgattccata gatattcagc aacaggatat ggatatagat gaagggcaag atggagtgga 1381 agaggaggtc tttgaacaag aagctaagaa agtggcggtt cgctcaagat caagaacaca 1441 ttcacgatct cgttcaagat caccaagaaa acgaaggtct aggtcacggt ctggctctag 1501 aaagcgtaaa cacagaaagc gatcacgctc ccgctcaaga gaaagaaaga ggaaatcatc 1561 acggtcgtat tcaagtgaaa ggagagccag agaaagggag aaagaacgac agaaaaaggg 1621 attacctcca attagatcta aaacactaag tgtatgtagt actactctct gggttgggca 1681 agtggacaag aaggcaacac agcaagactt aaccaacctg tttgaagagt ttggacagat 1741 tgaatccatt aatatgattc ctccccgggg ctgtgcttat gtctgcatgg ttcatcgaca 1801 agatgcattt cgagctcttc agaaactcag ttctggatca tataaaattg ggtccaaggt 1861 cattaagatc gcttgggctt taaacaaagg tgtaaaaaca gaatacaaac aattctggga 1921 tgtggatctt ggagttacat atataccatg ggaaaaagtt aaagtggatg acttggaagg 1981 ttttgcagaa ggaggcatga ttgatcagga gactgtaaat actgagtggg aaactgtgaa 2041 aagctcagaa cctgttaaag agacggtcca gacaactcag agcccaactc cagttgaaaa 2101 ggagacagtg gtcacaaccc aggcagaggt tttccctcct cctgttgcta tgttgcagat 2161 tccagtggcg ccagccgtgc ctacagttag tttagtccca ccagcatttc ctgtgtcgat 2221 gccggttcct cctcctggat tcagtccaat ccctccacct ccttttttaa gagcaagttt 2281 taacccttca caaccaccac ctggtttcat gccgcctcca gttcccccac ctgttgtgcc 2341 accccctacg attccaccag tagtaccaac atctttagtg cagccgtcat tatccatgac 2401 accggaaact gtgaaagatg ttggatttgg tagccttgtt ataccaggcg gttctgttgc 2461 cagcaatctt gctacttccg ctctgccagc tggaaatgtt tttaatgctc caactaaaca 2521 ggcagagcct gaagaaaaag tacctcatct tatagaccac cagatttctt ctggtgaaaa 2581 caccagatca gtgattccaa atgatatttc aagtaatgct gcaattttag gaggacagcc 2641 gccaaatgtg acaagcaatt ctggaattct gggagtccaa agaccaaatg tatcaagtaa 2701 ttctgaaatt cttggggtcc ggccatctaa tgtttccagt agttctggga ttattgcagc 2761 ccaaccacca aatattctaa ataactctgg aatattggga atacagccac ccagtgtgtc 2821 aaatagttct ggacttttgg gagtgctacc cccaaatata cctaacaatt ctggacttgt 2881 aggagtacag ccaccaaatg ttccaaatac tcctggactt ctgggaacac agccaccagc 2941 tggacctcaa aacttacccc ctttaagtat ccctaatcaa aggatgccca caatgccaat 3001 gttagacatt cgtccgggac taataccaca ggcacctggg ccaagattcc ctttaataca 3061 gcctggaatt ccaccccaac ggggaatccc acccccatcg gtacttgatt cagctcttca 3121 tccaccaccc cgtggacctt ttcctccagg agatattttt agtcaaccag aaagaccttt 3181 tttagctcct ggaagacaaa gcgtagacaa tgttactaac ccagaaaaaa ggataccact 3241 tgggaatgat aacattcaac aggaaggaga tagagattat cggtttcctc ctatagaaac 3301 cagggaaagc attagtagac ctccccctgt ggatgttaga gatgtggttg ggcggcctat 3361 agatccaaga gaaggtcctg gacggcctcc actagatggt agggatcatt ttggaagacc 3421 tcctgtagat ataagagaga atcttgtgag gccaggtata gatcatcttg gtcgaagaga 3481 ccactttggc tttaatccag agaagccctg ggggcataga ggagattttg atgagagaga 3541 gcatcgggtt ctaccggtct atggtggtcc aaaaggctta catgaagaaa gaggtagatt 3601 tcggtctgga aactatcgat ttgatcctag aagtggtcct tggaaccgag gatttggaca 3661 agaagttcac agagattttg atgaccgcag aagaccctgg gagaggcaaa gggataggga 3721 tgacagagat tttgatttct gcagagaaat gaatggaaat cgtcttggac gagacagaat 3781 tcaaaacact tgggttcccc ctcctcatgc tcgggttttt gattattttg aaggggccac 3841 ttctcaacga aaaggtgata atgtgcctca ggttaatggt gaaaatacag agagacatgc 3901 tcagccacca cctataccag tacagaatga tcctgaactt tatgaaaaac tgacatcttc 3961 aaatgaaata aacaaggaga agagtgacac agttgctgat atagaaagtg aaccagtggt 4021 agaaagcaca gaaactgagg ggacataatc atcactcagt aggtaaaaga taccttttgt 4081 aaagttgtca tctctctgta atagataatg gctgactgga ccatagttgt tcacttttgt 4141 ctgccagaat taagttaatc tgatgttcat gttcaccttt ctcttaaaat aattgtacaa 4201 ctgacttgta tagacattgt tcttaatatg aacatggtag gtaaactttt tttttatttt 4261 tttctgataa aatacaaatg ttggccccag attcttttaa cgtcaaggaa atgaataaca 4321 gcttgtcaga gacttcctat ggaagaaaga attttttaga tactatcatt aggttggata 4381 tggtaataga tatatttcag aatagcaagt ggtggtatat cttatccata tctttaggct 4441 gctgcagaat tttaaggtta tagataaagc tgtgatattt tatgcaaaga ctggctctag 4501 gtatttgagg agcacaatac agagatttta aaaagtgatt ttgtaaaatc tacactatgg 4561 tctctgtttc tccaaagtaa gtgtttgtga tttgttcctc atactgcagt gagtaaaaaa 4621 gaaacaagaa aacaacaaca taaatattaa agtacgtttc aatgttgggt gaattttgtt 4681 tttagatgcc aataaaactt atttgtttga caaaaaaaaa aaaaaaa //