LOCUS       BC070060                3381 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens sphingosine-1-phosphate phosphatase 1, mRNA (cDNA
            clone MGC:87248 IMAGE:30347615), complete cds.
ACCESSION   BC070060
VERSION     BC070060.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3381)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAY-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Stefan Hansson
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 168 Row: o Column: 22
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 40254975.
FEATURES             Location/Qualifiers
     source          1..3381
                     /db_xref="H-InvDB:HIT000264018"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:87248 IMAGE:30347615"
                     /tissue_type="Placenta, normal"
                     /clone_lib="NIH_MGC_147"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3381
                     /gene="SGPP1"
                     /gene_synonym="SPPase1"
                     /db_xref="GeneID:81537"
                     /db_xref="HGNC:HGNC:17720"
     CDS             112..1437
                     /gene="SGPP1"
                     /gene_synonym="SPPase1"
                     /codon_start=1
                     /product="sphingosine-1-phosphate phosphatase 1"
                     /protein_id="AAH70060.1"
                     /db_xref="GeneID:81537"
                     /db_xref="HGNC:HGNC:17720"
                     /translation="MSLRQRLAQLVGRLQDPQKVARFQRLCGVEAPPRRSADRREDEK
                     AEAPLAGDPRLRGRQPGAPGGPQPPGSDRNQCPAKPDGGGAPNGVRNGLAAELGPASP
                     RRAGALRRNSLTGEEGQLARVSNWPLYCLFCFGTELGNELFYILFFPFWIWNLDPLVG
                     RRLVVIWVLVMYLGQCTKDIIRWPRPASPPVVKLEVFYNSEYSMPSTHAMSGTAIPIS
                     MVLLTYGRWQYPLIYGLILIPCWCSLVCLSRIYMGMHSILDIIAGFLYTILILAVFYP
                     FVDLIDNFNQTHKYAPFIIIGLHLALGIFSFTLDTWSTSRGDTAEILGSGAGIACGSH
                     VTYNMGLVLDPSLDTLPLAGPPITVTLFGKAILRILIGMVFVLIIRDVMKKITIPLAC
                     KIFNIPCDDIRKARQHMEVELPYRYITYGMVGFSITFFVPYIFFFIGIS"
BASE COUNT          949 a          641 c          708 g         1083 t
ORIGIN      
        1 agactccgga gggtagagcg ctgtgccggt tccgctgccg ctggccagga gcgcggggac
       61 agttcggggc tgcgccggag gccggcccgc cttcccgggg gttccgttat catgtcgctg
      121 aggcagcgcc tggcccagct ggttggccgt ctgcaggacc cgcagaaagt ggcccgtttc
      181 cagcggctgt gcggggtgga agcgccgccg cgccgctcag cagaccggag ggaggatgag
      241 aaagcggagg cgcctctcgc cggagaccct cgactgcgag ggcggcagcc aggggcgcct
      301 ggaggccccc agcctcccgg gagcgaccgc aatcagtgcc cggccaagcc ggacggcggc
      361 ggcgccccca acggcgtgcg gaacgggctg gcggccgagc tgggcccggc ctcgccgcgg
      421 cgcgcgggcg ctctgcgccg caactcgctg acgggcgagg agggccagct ggcccgcgtg
      481 agcaactggc cgctctactg cctgttctgc ttcggcacgg agctgggcaa cgaactcttc
      541 tacatcctgt tcttcccctt ctggatctgg aacctggacc ctctggtggg ccggaggctc
      601 gtggtcatct gggtgctggt catgtacctg ggccagtgca ccaaggacat catccgctgg
      661 ccgaggcccg cctcgccgcc cgtggtcaag ttggaggtct tctacaactc tgagtacagc
      721 atgccctcca cccatgccat gtccggcacc gccatcccca tttctatggt cctcctcacc
      781 tatggccgct ggcagtaccc tcttatatat ggactgattc ttattccctg ctggtgttct
      841 ctagtttgcc taagtagaat ttacatggga atgcactcta ttctggatat tattgctgga
      901 ttcctatata ccattttaat cttagctgtc ttctatccat ttgtggacct gattgacaac
      961 ttcaaccaaa ctcacaaata tgctccattc atcatcatcg ggcttcattt agctttgggg
     1021 atcttttctt tcactcttga cacctggagc acatcccgag gagacacagc cgagatacta
     1081 ggaagtggtg ctggaattgc atgtggatct catgttactt ataacatggg tctagtatta
     1141 gatccttctc tagatacatt acctttagct gggcccccca ttactgtgac tctgtttgga
     1201 aaagccatat tgcggatcct catagggatg gtatttgtac taataatcag agatgtaatg
     1261 aaaaagatca ccattccttt agcctgcaaa atcttcaata taccgtgtga tgatattcga
     1321 aaagcaagac agcacatgga agttgaactt ccttatcggt atattaccta tggaatggtt
     1381 ggtttctcca tcacattttt tgttccttac atatttttct ttattggtat ctcttgatgg
     1441 agaagtattg tttatgataa gaaaggaggg tatcagttac tgatacccaa aaatatattc
     1501 caggtaaagc caggtcagaa ttaggctttt gcaggaattt aacttaaata attatttaag
     1561 taaattcata agagtcagtg cattttatca ttgcacatcc agatactgtt ttaggtgagc
     1621 tgagctattt cgttactgag aaaatgataa gtatccattt agaatgttca tgtaatgttt
     1681 ggagagtttt gtattatgga ttcaacttat atataatata tataaggtac ataatatgca
     1741 attgtgtatc tgatatatat tatatataaa ataatatacc taagtgtttt tttaaactat
     1801 ggggtgtatt ataaaatcaa taataatatg caaacagttg tgcctgtgta tttgaactac
     1861 atacaggtat gttgttatta acagatatat ttaacattta tttactatgg gagccatttc
     1921 ctaattgaat tgcgtaatta ctagaccaga atgcatatgc tactatacat tgatttactg
     1981 cctgttttta cactgccatt acctttcatg ttatccatga tgttgaacat gggaggcatt
     2041 tttaatggac caaattttta gaaaaattag tttttggatt tttttttaag ttctgtatac
     2101 tgttttgaat gaactttatt tgcagctatt ctggatgtca gtttaataat tcaggtactg
     2161 aattttattg cttgctaatt gtgcctttcc gttgctaaat taagaaatgc tatgtgtact
     2221 gtgatgtaaa aataagacat taactttatc ttaagttaca tataatcaag caaatatttt
     2281 aaaaaatgta tgtcagggtg acaggcataa aagtaaatta cccttaactc tttagccttt
     2341 atttagaaag aaatgtggaa tgggctaaac tttctcacca atttattaga aagctaaatg
     2401 gataaatact tccctttttg tagatatttt tctgtgcatt gtaagttata ggagcaggac
     2461 atattttttg tacattgtct tgattgttta tactgcaggt aggtatttcc agtgaatgga
     2521 aacgttgaaa tttatagatg ggacaatgca catacttcat atgtaaacaa agcatttttc
     2581 taaataattt ggaaaggatt ggatttagca ccgttaactt ttaataccca tttattggct
     2641 atttaaggta aattataaaa cctaaaatta gtatcagtat tttagatcct attatttttt
     2701 caactttcta ttattttcac agtggaaaat ttgcgtatag tattaaacta ttcttttttc
     2761 tgtctacctt tatattttga agtgtggttg tacttacgtt aatagtaagt gtatttgtag
     2821 aaagtttttc ataaagaaga gattaacttt ccatataaat aaataccagg tatgaaatta
     2881 ctgattttag tgcaatatct gtatgattat ccagaactat cacttcagat gtttctattt
     2941 tgggcaccat aactatttga gctcatattt ttataattct gattgagaat ttaggggcat
     3001 ggtaattttt accaaaactg aagctggtaa ttttaagtaa agcaactaaa tttacccttt
     3061 acttattagt taaaaggaaa ccaaggcatg taggaaaata ttggtacgtt ggaaaatgtg
     3121 aaaagagctt tactttcaaa atgtatgttt aatgaattga attttaggga ccgtttccca
     3181 taatttgggc ctatgctatc ctgttgattt ttatgtctag cttaaaaggt atttgaaaat
     3241 gttccatttg tgttttatta ttttctgtcc tatgacagtt ctatgctaaa tgtattttaa
     3301 aataaaagcc aaattgaaga ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3361 aaaaaagaaa aaaaaaaaaa a
//