LOCUS BC069254 2180 bp mRNA linear HUM 16-MAR-2005
DEFINITION Homo sapiens CUB domain containing protein 1, mRNA (cDNA clone
IMAGE:4589711), partial cds.
ACCESSION BC069254
VERSION BC069254.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: c Column: 19.
FEATURES Location/Qualifiers
source 1..2180
/db_xref="H-InvDB:HIT000263408"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4589711"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2180
/gene="CDCP1"
/gene_synonym="CD318"
/gene_synonym="SIMA135"
/db_xref="GeneID:64866"
CDS 89..>2180
/gene="CDCP1"
/gene_synonym="CD318"
/gene_synonym="SIMA135"
/codon_start=1
/product="CDCP1 protein"
/protein_id="AAH69254.1"
/db_xref="GeneID:64866"
/translation="MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLI
KLGTPTLLAKPCYIVISKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSG
PCPFGEVQLQPSTSLLPTLNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVT
HSISGRIDATVVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIK
RLCIIESVFEGEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCER
KEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLV
QHPQNESNKIYVVDLSNERAMSLTIEPRPVKQSRKFVPGCFVCLESRTCSSNLTLTSG
SKHKISFLCDDLTRLWMNVEKTISCTDHRYCQRKSYSLQVPSDILHLPVELHDFSWKL
LVPKDRLSLVLVPAQKLQQHTHEKPCNTSFSYLVASAIPSQDLYFGSFCPGGSIKQIQ
VKQNISVTLRTFAPSFRQEASRQGLTVSFIPYFKEEGVFTVTPDTKSKVYLRTPNWDR
GLPSLTSVSWNISVPRDQVACLTFFKERSGVVCQTGRAFMIIQEQRTRAEEIFSLDED
VLPKPSFHHHSFWVNISNCSPTSGKQLDLLFSVTLTPRTVDLTVILIAVVGGGVLLLS
ALGLIICCVKKKKKK"
BASE COUNT 504 a 646 c 560 g 470 t
ORIGIN
1 gcggagcgca gctgcgccgg gcttgggcgc ctggggccgc cgctccccac cgtcgttttc
61 cccaccgagg ccgaggcgtc ccggagtcat ggccggcctg aactgcgggg tctctatcgc
121 actgctaggg gttctgctgc tgggtgcggc gcgcctgccg cgcggggcag aagcttttga
181 gattgctctg ccacgagaaa gcaacattac agttctcata aagctgggga ccccgactct
241 gctggcaaaa ccctgttaca tcgtcatttc taaaagacat ataaccatgt tgtccatcaa
301 gtctggagaa agaatagtct ttacctttag ctgccagagt cctgagaatc actttgtcat
361 agagatccag aaaaatattg actgtatgtc aggcccatgt ccttttgggg aggttcagct
421 tcagccctcg acatcgttgt tgcctaccct caacagaact ttcatctggg atgtcaaagc
481 tcataagagc atcggtttag agctgcagtt ttccatccct cgcctgaggc agatcggtcc
541 gggtgagagc tgcccagacg gagtcactca ctccatcagc ggccgaatcg atgccaccgt
601 ggtcaggatc ggaaccttct gcagcaatgg cactgtgtcc cggatcaaga tgcaagaagg
661 agtgaaaatg gccttacacc tcccatggtt ccaccccaga aatgtctccg gcttcagcat
721 tgcaaaccgc tcatctataa aacgtctgtg catcatcgag tctgtgtttg agggtgaagg
781 ctcagcaacc ctgatgtctg ccaactaccc agaaggcttc cctgaggatg agctcatgac
841 gtggcagttt gtcgttcctg cacacctgcg ggccagcgtc tccttcctca acttcaacct
901 ctccaactgt gagaggaagg aggagcgggt tgaatactac atcccgggct ccaccaccaa
961 ccccgaggtg ttcaagctgg aggacaagca gcctgggaac atggcgggga acttcaacct
1021 ctctctgcaa ggctgtgacc aagatgccca aagtccaggg atcctccggc tgcagttcca
1081 agttttggtc caacatccac aaaatgaaag caataaaatc tacgtggttg acttgagtaa
1141 tgagcgagcc atgtcactca ccatcgagcc acggcccgtc aaacagagcc gcaagtttgt
1201 ccctggctgt ttcgtgtgtc tagaatctcg gacctgcagt agcaacctca ccctgacatc
1261 tggctccaaa cacaaaatct ccttcctttg tgatgatctg acacgtctgt ggatgaatgt
1321 ggaaaaaacc ataagctgca cagaccaccg gtactgccaa aggaaatcct actcactcca
1381 ggtgcccagt gacatcctcc acctgcctgt ggagctgcat gacttctcct ggaagctgct
1441 ggtgcccaag gacaggctca gcctggtgct ggtgccagcc cagaagctgc agcagcatac
1501 acacgagaag ccctgcaaca ccagcttcag ctacctcgtg gccagtgcca tacccagcca
1561 ggacctgtac ttcggctcct tctgcccggg aggctctatc aagcagatcc aggtgaagca
1621 gaacatctcg gtgacccttc gcacctttgc ccccagcttc cgacaagagg cctccaggca
1681 gggtctgacg gtgtccttta taccttattt caaagaggaa ggcgttttca cggtgacccc
1741 tgacacaaaa agcaaggtct acctgaggac ccccaactgg gaccggggcc tgccatccct
1801 cacctctgtg tcctggaaca tcagcgtgcc cagagaccag gtggcctgcc tgactttctt
1861 taaggagcgg agcggcgtgg tctgccagac agggcgcgca ttcatgatca tccaggagca
1921 gcggacccgg gctgaggaga tcttcagcct ggacgaggat gtgctcccca agccaagctt
1981 ccaccatcac agcttctggg tcaacatctc taactgcagc cccacgagcg gcaagcagct
2041 agacctgctc ttctcggtga cacttacccc aaggactgtg gacttgactg tcatcctcat
2101 cgcagtggtg ggaggtggag tcttactgct gtctgccctc gggctcatca tttgctgtgt
2161 gaaaaaaaaa aaaaaaaaaa
//