LOCUS BC069249 2581 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens serrate RNA effector molecule homolog (Arabidopsis), mRNA (cDNA clone IMAGE:5427083), partial cds. ACCESSION BC069249 VERSION BC069249.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2581) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2581) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 54 Row: f Column: 9. FEATURES Location/Qualifiers source 1..2581 /db_xref="H-InvDB:HIT000263403" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5427083" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene <1..2581 /gene="SRRT" /gene_synonym="ARS2" /gene_synonym="ASR2" /gene_synonym="serrate" /db_xref="GeneID:51593" /db_xref="HGNC:HGNC:24101" CDS <1..2440 /gene="SRRT" /gene_synonym="ARS2" /gene_synonym="ASR2" /gene_synonym="serrate" /codon_start=2 /product="SRRT protein" /protein_id="AAH69249.1" /db_xref="GeneID:51593" /db_xref="HGNC:HGNC:24101" /translation="RFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPT YGPPQPWGHPDVHIMQHHVLPIQARLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDET EAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVF LSLMETGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGE PSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKED SEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKE EEWEKPKDAAGLECKPRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQ PERRFFRRGWVTFDRSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHK QIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPLPTSLPSQNPILKNITDYLIEEVSAE EEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEY PNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKM GRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE VAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQPRPP ILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRGDPRAIV EYRDLDAPDDVDFF" BASE COUNT 668 a 687 c 776 g 450 t ORIGIN 1 gcgcttctcg ccacctcgcc acgaactcag cccgccacag aagcgcatga ggagagactg 61 ggatgagcac agctctgacc cataccacag tggctatgag atgccctatg ctgggggggg 121 tgggggccca acttatggcc cccctcagcc ctggggccac cctgacgtcc acatcatgca 181 gcaccatgtc ctgcctatcc aggccaggct gggcagcatt gcagagattg acctgggtgt 241 gccgccgccc gtgatgaaga ccttcaagga gtttctcctc tccctggatg actcggtgga 301 tgagacggag gccgtcaagc gctataatga ctacaagctg gatttccgga ggcaacagat 361 gcaggatttc ttcctggcgc acaaagatga ggagtggttt cggtctaagt accacccaga 421 tgaggtgggg aagcgtcggc aggaggcccg gggggccctg caaaaccgac tgagggtctt 481 cctgtccctc atggagactg gctggtttga taaccttctc ctggacatag acaaagctga 541 tgccattgtc aagatgctgg atgcagccgt gattaagatg gaaggaggca cggagaatga 601 tctccgcatc ctggagcagg aggaggagga ggagcaggca ggaaagcctg gggagcccag 661 caagaaagaa gaaggacggg ctggagcagg cctaggggac ggggagcgca aaaccaacga 721 caaggatgag aagaaggaag acggcaagca ggctgagaat gacagttcta atgatgacaa 781 aacaaagaag tcggagggtg atggggacaa ggaagagaag aaagaagact ccgagaagga 841 agccaaaaag agtagcaaga agcggaaccg gaagcacagt ggtgacgaca gctttgacga 901 gggcagcgtg tcagagtctg agtcggagtc agagagcggc caggctgagg aggagaagga 961 ggaggccgaa gaagcgctca aggagaagga gaagcccaag gaagaagaat gggagaagcc 1021 caaggacgcc gcggggctgg agtgcaagcc gcggccgctg cataagacct gctccctctt 1081 catgcgcaac atcgcgccca acatctcccg ggccgagatc atctcccttt gtaaaaggta 1141 cccaggcttt atgcgggtgg cgctctcaga gccccagcca gagaggaggt ttttccgtcg 1201 tggctgggtg accttcgacc gcagtgttaa cattaaagag atctgttgga acctgcagaa 1261 catccgtctc cgggagtgtg agctgagccc tggtgtgaac agggacctga cccggcgcgt 1321 tcgcaacatc aacggcatca cccagcacaa gcagattgtg cgcaacgaca tcaagctggc 1381 ggccaagctg atccacacgc tggatgacag gacacagctt tgggcctcag aaccagggac 1441 gcctcccctg cccacgagcc tgccctcgca aaacccgatc ttgaagaata tcaccgacta 1501 cctgatcgag gaagtaagcg ccgaggagga ggagctgctg gggagcagcg ggggcgctcc 1561 tcctgaggag cctcctaagg aagggaaccc ggcagagatc aacgtggagc gggatgagaa 1621 gttgattaag gtcttggaca agctcctcct ttacctgcgc atcgtgcatt ccttggatta 1681 ttacaacacc tgtgagtacc ccaacgagga cgagatgccc aatcgctgtg ggatcatcca 1741 cgttcggggg cccatgccac ccaaccgcat cagtcacggg gaagtgctgg agtggcagaa 1801 gacttttgag gagaagctca cgccgttgct gagtgtgcgg gagtcactct cagaggaaga 1861 ggcccagaag atggggcgca aagacccaga gcaggaagtg gagaagttcg tcacctccaa 1921 cacgcaggaa ctgggcaagg ataagtggct gtgtcctctc agtggcaaga aattcaaggg 1981 tcctgagttt gtgcgcaaac atatcttcaa caagcatgca gagaaaattg aggaagtgaa 2041 aaaggaagtc gcgtttttta acaacttcct cactgatgct aagcgcccag ctctgcctga 2101 gatcaagcca gcccagccac ctggccccgc ccagatactc cccccaggtt tgaccccagg 2161 actcccctac ccacaccaga ctccccaggg cctgatgccc tatggtcagc cccggccccc 2221 gatcttgggc tatggagctg gtgctgtccg ccctgcagtc cccacaggag gccctccata 2281 cccccatgcc ccgtatggtg ctggtcgagg gaactatgat gccttccgag gccagggagg 2341 ttatcctggg aaacctcgca acaggatggt tcgtggagac ccaagggcca ttgtggaata 2401 tcgggacctg gatgccccag acgatgttga tttcttttga gccgtccccc gttcctcagt 2461 cctgtatcat ccatacttgt actaccttgt cctatgaagc tctgagaatt ttttgtacga 2521 tcagccttac tgctaataaa agcacttcca cagggaaaaa aaaaaaaaaa aaaaaaaaaa 2581 a //