LOCUS BC069228 2548 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class S, mRNA (cDNA clone MGC:78407 IMAGE:3944034), complete cds. ACCESSION BC069228 VERSION BC069228.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2548) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2548) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 54 Row: b Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23397651. FEATURES Location/Qualifiers source 1..2548 /db_xref="H-InvDB:HIT000263382" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:78407 IMAGE:3944034" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2548 /gene="PIGS" /db_xref="GeneID:94005" /db_xref="HGNC:HGNC:14937" CDS 24..1691 /gene="PIGS" /codon_start=1 /product="phosphatidylinositol glycan anchor biosynthesis, class S" /protein_id="AAH69228.1" /db_xref="GeneID:94005" /db_xref="HGNC:HGNC:14937" /translation="MAAAGAAATHLEVARGKRAALFFAAVAIVLGLPLWWKTTETYRA SLPYSQISGLNALQLRLMVPVTVVFTRESVPLDDQEKLPFTVVHEREIPLKYKMKIKC RFQKAYRRALDHEEEALSSGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSLLPQDMMS YIGPKRTAVVRGIMHREAFNIIGRRIVQVAQAMSLTEDVLAAALADHLPEDKWSAEKR RPLKSSLGYEITFSLLNPDPKSHDVYWDIEGAVRRYVQPFLNALGAAGNFSVDSQILY YAMLGVNPRFDSASSSYYLDMHSLPHVINPVESRLGSSAASLYPVLNFLLYVPELAHS PLYIQDKDGAPVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQ LRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLG KISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDPSLL HLLYFPDDQKFAIYIPLFLPMAVPILLSLVKIFLETRKSWRKPEKTD" BASE COUNT 532 a 701 c 680 g 635 t ORIGIN 1 ggccggagca gccggaagct agcatggcgg ccgccggggc tgcggctaca cacctagagg 61 tggcccgggg caagcgcgcc gccctcttct tcgctgcggt ggccatcgtg ctggggctac 121 cgctctggtg gaagaccacg gagacctacc gggcctcgtt gccttactcc cagatcagtg 181 gcctgaatgc ccttcagctc cgcctcatgg tgcctgtcac tgtcgtgttt acgcgggagt 241 cagtgcccct ggacgaccag gagaagctgc ccttcaccgt tgtgcatgaa agagagattc 301 ctctgaaata caaaatgaaa atcaaatgcc gtttccagaa ggcctatcgg agggctttgg 361 accatgagga ggaggccctg tcatcgggca gtgtgcaaga ggcagaagcc atgttagatg 421 agcctcagga acaagcggag ggctccctga ctgtgtacgt gatatctgaa cactcctcac 481 ttcttcccca ggacatgatg agctacattg ggcccaagag gacagcagtg gtgcggggga 541 taatgcaccg ggaggccttt aacatcattg gccgccgcat agtccaggtg gcccaggcca 601 tgtctttgac tgaggatgtg cttgctgctg ctctggctga ccaccttcca gaggacaagt 661 ggagcgctga gaagaggcgg cctctcaagt ccagcttggg ctatgagatc accttcagtt 721 tactcaaccc agaccccaag tcccatgatg tctactggga cattgagggg gctgtccggc 781 gctatgtgca acctttcctg aatgccctcg gtgccgctgg caacttctct gtggactctc 841 agattcttta ctatgcaatg ttgggggtga atccccgctt tgactcagct tcctccagct 901 actatttgga catgcacagc ctcccccatg tcatcaaccc agtggagtcc cggctgggat 961 ccagtgctgc ctccttgtac cctgtgctca actttctact ctacgtgcct gagcttgcac 1021 actcaccgct gtacattcag gacaaggatg gcgctccagt ggccaccaat gccttccata 1081 gtccccgctg gggtggcatt atggtatata atgttgactc caaaacctat aatgcctcag 1141 tgctgccagt gagagtcgag gtggacatgg tgcgagtgat ggaggtgttc ctggcacagt 1201 tgcggttgct ctttgggatt gctcagcccc agctgcctcc aaaatgcctg ctttcagggc 1261 ctacgagtga agggctaatg acctgggagc tagaccggct gctctgggct cggtcagtgg 1321 agaacctggc cacagccacc accaccctta cctccctggc gcagcttctg ggcaagatca 1381 gcaacattgt cattaaggac gacgtggcat ctgaggtgta caaggctgta gctgccgtcc 1441 agaagtcggc agaagagttg gcgtctgggc acctggcatc tgcctttgtc gccagccagg 1501 aagctgtgac atcctctgag cttgccttct ttgacccgtc actcctccac ctcctttatt 1561 tccctgatga ccagaagttt gccatctaca tcccactctt cctgcctatg gctgtgccca 1621 tcctcctgtc cctggtcaag atcttcctgg agacccgcaa gtcctggaga aagcctgaga 1681 agacagactg agcagggcag cacctccata ggaagccttc ctttctggcc aaggtgggcg 1741 gtgttagatt gtgaggcacg tacatggggc ctgccggaat gacttaaata tttgtctcca 1801 gtctccactg ttggctctcc agcaaccaaa gtacaacact ccaagatggg ttcatctttt 1861 cttcctttcc cattcacctg gctcaatcct cctccaccac caggggcctc aaaaggcaca 1921 tcatccgggt ctccttatct tgtttgataa ggctgctgcc tgtctccctc tgtggcaagg 1981 actgtttgtt cttttgcccc atttctcaac atagcacact tgtgcactga gaggagggag 2041 cattatggga aagtccctgc cttccacacc tctctctagt ccctgtggga cagccctagc 2101 ccctgctgtc atgaaggggc caggcattgg tcacctgtgg gaccttctcc ctcactcccc 2161 tccctcctag ttggctttgt ctgtcaggtg cagtctggcg ggagtccagg aggcagcagc 2221 tcaggacatg gtgctgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtcagaggt 2281 tccagaaagt tccagatttg gaatcaaaca gtcctgaatt caaatccttg tttttgcact 2341 tattgtctgg agagctttgg ataaggtatt gaatctctct gagcctcagt ttttcatttg 2401 ttcaaatggc actgatgatg tctcccttac aagatggttg tgaggagtaa atgtgatcag 2461 catgtaaagt gtctggcgtg tagtaggctc ttaataaaca ctggctgaat atgaattgga 2521 atgataaaaa aaaaaaaaaa aaaaaaaa //