LOCUS BC069227 2725 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens tripartite motif-containing 11, mRNA (cDNA clone MGC:78395 IMAGE:4875080), complete cds. ACCESSION BC069227 VERSION BC069227.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2725) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2725) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 54 Row: e Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24497621. FEATURES Location/Qualifiers source 1..2725 /db_xref="H-InvDB:HIT000263381" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:78395 IMAGE:4875080" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2725 /gene="TRIM11" /gene_synonym="BIA1" /gene_synonym="RNF92" /db_xref="GeneID:81559" /db_xref="HGNC:HGNC:16281" /db_xref="MIM:607868" CDS 247..1653 /gene="TRIM11" /gene_synonym="BIA1" /gene_synonym="RNF92" /codon_start=1 /product="tripartite motif-containing 11" /protein_id="AAH69227.1" /db_xref="GeneID:81559" /db_xref="HGNC:HGNC:16281" /db_xref="MIM:607868" /translation="MAAPDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCW GQPEGPYACPECRELSPQRNLRPNRPLAKMAEMARRLHPPSPVPQGVCPAHREPLAAF CGDELRLLCAACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQA DETCVLWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHL GQQSAHLAELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVP GLVETLRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQ ERFTSGRHYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSER ALAPLRDPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPT PMTICRPKGGSGDTLAPQ" BASE COUNT 503 a 848 c 875 g 499 t ORIGIN 1 gggatcccta cgtcccgcgt cccccgagcg ctcggagcct acgcgcccag cgctaccgaa 61 acccagagtc ctgcgccctg gagtccccgc gccccggagc ccgagcaccc gggagtcccg 121 agcctcgcgc cccggagtgc ccgagcctgc gccgccgcac ccggataccc cgcgtccccg 181 cgagctgccg aggccgcccg ccgccgcccc gcggacagta ccgccttcct cccctctgtc 241 cgcgccatgg ccgcccccga cctgtccacc aacctccagg aggaggccac ctgcgccatc 301 tgcctcgact acttcacgga tccggtgatg accgactgcg gccacaactt ctgccgcgag 361 tgcatccggc gctgctgggg ccagcccgag ggcccgtacg cgtgccccga gtgccgcgag 421 ctgtccccgc agaggaacct gcggcccaac cgcccgcttg ctaagatggc cgagatggcg 481 cggcgcctgc acccgccgtc gccggtcccg cagggcgtgt gccccgcgca ccgcgagcca 541 ctggccgcct tctgtggcga cgagctgcgc ctcctgtgtg cggcctgcga gcgctctggg 601 gagcactggg cgcaccgcgt gcggccgctg caggacgcgg ccgaagacct caaggcgaag 661 ctggagaagt cactggagca tctccggaag cagatgcagg atgcgttgct gttccaagcc 721 caggcggatg agacctgcgt cttgtggcag aagatggtgg agagccagcg gcagaacgtg 781 ctgggtgagt tcgagcgtct tcgccgtttg ctggcagagg aggagcagca gctgctgcag 841 aggctggagg aggaggagct ggaggtgctg ccccggctgc gggagggcgc agcccaccta 901 ggccagcaga gcgcccacct agctgagctc atcgccgagc tcgagggccg ctgccagctg 961 cctgctctgg ggctgctgca ggacatcaag gacgccctgc gcagggtcca ggatgtgaag 1021 ctgcagcccc cagaagttgt gcctatggag ctgaggaccg tgtgcagggt cccgggactg 1081 gtagagacac tgcggaggtt tcgaggggac gtgaccttgg acccggacac cgccaaccct 1141 gagctgatcc tgtctgaaga caggcggagc gtgcagcggg gggacctacg gcaggccctg 1201 ccggacagcc cagagcgctt tgaccccggc ccctgcgtgc tgggccagga gcgcttcacc 1261 tcaggccgcc actactggga ggtggaggtt ggggaccgca ccagctgggc cctgggggtg 1321 tgcagggaga acgtgaacag gaaggagaag ggcgagctgt ccgcgggcaa cggcttctgg 1381 atcctggtct tcctggggag ctattacaat tcctcggaac gggccttggc tccactccgg 1441 gacccaccca ggcgcgtggg gatctttctg gactacgagg ctggacatct ctctttctac 1501 agtgccaccg atgggtcact gctattcatc tttcccgaga tccccttctc ggggacgctg 1561 cggcccctct tctcacccct gtccagcagc ccgaccccga tgactatctg ccggccgaaa 1621 ggtgggtccg gggacaccct ggctccccag tgactcgggc cctcctggag gagtcctgtt 1681 gcctctcctg cccctccagg ccactgagtg ttttggccac ttggaggacc tgggaggagg 1741 gagtgtgtcc tttgagcaag aggaggaact cctggtgcct ttctgagcct gcgtgggaga 1801 accccaattc tagcactcca ggaaactgtg ggagagtgtg gggcaggctc cgtcctccct 1861 gggagacccc tccagccacc gggtgccact taatgccaac agcccttacc aaagctggga 1921 gccccattgc cccggcagct ctggcctgtg gttccagaag ctgagaaaac tccactgggg 1981 cttgcagaat ccagggttca cctaagctgc acagttcctg cagctttgcc agccccctga 2041 aagtcttgtg taccccacct ctgaagatgc tgggggaggc agctgggatg ggagccagcc 2101 ccatgcctgt ctgtgacccc acagtgggtg agagcccgtc acagtcctgg gtgtggctgc 2161 tctggaagaa ttaggaggca gccataataa gagtcttcag agagatgatg ggaggggcca 2221 gtgaggacag gaacagagag tagatgtcct ataataaagg ggcttctggg aggtgcctgg 2281 gcacagatgt ctgttcagca ggtgtgtggg cctagaggag agagcagagc ccagaaatgt 2341 cttttgcagg cccacgttct gacttgaagc tttcgtgggc atgttgccat tgggttttgc 2401 ccttgcaaag gcttcctagg tctccagtgg cccctcagga cccagggtcc cagctgctgc 2461 ttggggatgt gcactgctgg ccgccggcct tgcagtctct ctaccctggg gaggaacagt 2521 ggcttctcag agcctggggc atacagaaga aggcaggagt tgatttttgt gttgggtttg 2581 gggtttcttt gtcctcaagg tactgttctg tttctcttta cccctctgct ttatttattg 2641 taagcattcc cacgttaaat aaactttggc tgttgtctac aaaaaaaaaa aaaaaaaaaa 2701 aaaaaaaaaa aaaaaaaaaa aaaaa //