LOCUS BC069200 738 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens growth arrest and DNA-damage-inducible, gamma
interacting protein 1, mRNA (cDNA clone MGC:78462 IMAGE:5467620),
complete cds.
ACCESSION BC069200
VERSION BC069200.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 738)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 738)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543414.
FEATURES Location/Qualifiers
source 1..738
/db_xref="H-InvDB:HIT000263360"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78462 IMAGE:5467620"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..738
/gene="GADD45GIP1"
/gene_synonym="CKBBP2"
/gene_synonym="CRIF1"
/gene_synonym="MGC4667"
/gene_synonym="MGC4758"
/gene_synonym="PLINP-1"
/gene_synonym="Plinp1"
/gene_synonym="PRG6"
/db_xref="GeneID:90480"
/db_xref="HGNC:HGNC:29996"
/db_xref="MIM:605162"
CDS 3..671
/gene="GADD45GIP1"
/gene_synonym="CKBBP2"
/gene_synonym="CRIF1"
/gene_synonym="MGC4667"
/gene_synonym="MGC4758"
/gene_synonym="PLINP-1"
/gene_synonym="Plinp1"
/gene_synonym="PRG6"
/codon_start=1
/product="growth arrest and DNA-damage-inducible, gamma
interacting protein 1"
/protein_id="AAH69200.1"
/db_xref="GeneID:90480"
/db_xref="HGNC:HGNC:29996"
/db_xref="MIM:605162"
/translation="MAASVRQARSLLGVAATLAPGSRGYRARPPPRRRPGPRWPDPED
LLTPRWQLGPRYAAKQFARYGAASGVVPGSLWPSPEQLRELEAEEREWYPSLATMQES
LRVKQLAEEQKRREREQHIAECMAKMPQMIVNWQQQQRENWEKAQADKERRARLQAEA
QELLGYQVDPRSARFQELLQDLEKKERKRLKEEKQKRKKEARAAALAAAVAQDPAASG
APSS"
BASE COUNT 165 a 221 c 261 g 91 t
ORIGIN
1 agatggcggc gtccgtgcga caggcacgca gcctactagg tgtggcggcg accctggccc
61 cgggttcccg tggctaccgg gcgcggccgc ccccgcgccg caggccggga ccccggtggc
121 cagaccccga ggacctcctg accccgcggt ggcagctggg accgcgctac gcggctaagc
181 agttcgcgcg ttacggcgcc gcctccgggg tggtccccgg ttcgttatgg ccgtcgccgg
241 agcagctgcg ggagctggag gccgaagaac gcgaatggta cccgagcctg gcgaccatgc
301 aggagtcgct gcgggtgaag cagctggccg aagagcagaa gcgtcgggag agggagcagc
361 acatcgcaga gtgcatggcc aagatgccac agatgattgt gaactggcag cagcagcagc
421 gggagaactg ggagaaggcc caggctgaca aggagaggag ggcccgactg caggctgagg
481 cccaggagct cctgggctac caggtggacc caaggagtgc ccgcttccag gagctgctcc
541 aggacctaga gaagaaggag cgcaagcgcc tcaaggagga aaaacagaaa cggaagaagg
601 aggcgcgagc tgctgcattg gctgcagctg tggctcaaga cccagcagcc tctggggcac
661 ccagctcctg aggctttgtc ccttcccaat aaagcctgct acctggcagt acccctgaag
721 aaaaaaaaaa aaaaaaaa
//