LOCUS BC069199 2066 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens BTB (POZ) domain containing 2, mRNA (cDNA clone
IMAGE:5474960), partial cds.
ACCESSION BC069199
VERSION BC069199.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2066)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2066)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127579.
FEATURES Location/Qualifiers
source 1..2066
/db_xref="H-InvDB:HIT000263359"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5474960"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2066
/gene="BTBD2"
/gene_synonym="FLJ20386"
/db_xref="GeneID:55643"
/db_xref="MIM:608531"
CDS <1..1004
/gene="BTBD2"
/gene_synonym="FLJ20386"
/codon_start=3
/product="BTBD2 protein"
/protein_id="AAH69199.1"
/db_xref="GeneID:55643"
/db_xref="MIM:608531"
/translation="TLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQARLFDEPQ
LASLCLENIDKNTADAITAEGFTDIDLDTLVAVLERDTLGIREVRLFNAVVRWSEAEC
QRQQLQVTPENRRKVLGKALGLIRFPLMTIEEFAAGPAQSGILVDREVVSLFLHFTVN
PKPRVEFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLYG
SIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKEPVEVLPNVNYTAC
ATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSVEDGQIPEVIFYT"
BASE COUNT 388 a 718 c 599 g 361 t
ORIGIN
1 ccacgctata caccgccaag aagtacgcgg tgccagcgct cgaggcccat tgcgtggagt
61 tcctgaagaa gaacctgcga gccgacaacg ccttcatgct gctcacgcag gcgcgactct
121 tcgatgaacc gcagctggcc agcctgtgcc tggagaacat cgacaaaaac actgcagacg
181 ccatcaccgc ggagggcttc accgacattg acctggacac gctggtggct gtcctggagc
241 gcgacacact gggcatccgt gaggtgcggc tgttcaatgc cgttgtccgc tggtccgagg
301 ccgagtgtca gcggcagcag ctgcaggtga cgccagagaa caggcggaag gttctgggca
361 aggccctggg cctcattcgc ttcccgctca tgaccatcga ggagttcgct gcaggtcccg
421 cacagtcggg catcctggtg gaccgcgagg tggtcagcct cttcctgcac ttcaccgtca
481 accccaagcc acgagtggag ttcattgacc ggccccgctg ctgcctgcgt gggaaggagt
541 gcagcatcaa ccgcttccag caggtggaga gtcgctgggg ctacagcggg accagtgacc
601 gcatcaggtt ctcagtcaac aagcgcatct tcgtggtggg atttgggctg tatggatcca
661 tccacgggcc caccgactac caagtgaaca tccagattat tcacaccgat agcaacaccg
721 tcttgggcca gaacgacacg ggcttcagct gcgacggctc agccagcacc ttccgcgtca
781 tgttcaagga gccggtggag gtgctgccca acgtcaacta cacggcctgt gccacgctca
841 agggcccaga ctcccactac ggcaccaaag gcctgcgcaa ggtgacacac gagtcgccca
901 ccacgggcgc caagacctgc ttcacctttt gctacgcggc cgggaacaac aatggcacat
961 ccgtggagga cggccagatc cccgaggtca tcttctacac ctaggctgcc cgacaccgac
1021 accgccctcc ctccgcgggg atagccgcag ccccaggcca tcatctgctg ctggggtccc
1081 cccaccacgc ggtgccaggc ccagtgtccc ccaggccgtc tgtccactcc atgccacctt
1141 tctcagcatc aggacggggt tgccctgtgt tcaccacgag tgtggctgct ggatcagggc
1201 agccggggag gtggccaggc cagtggccag gccctgtgga gacaatccct caggactagg
1261 gacagggctg tgccggcctg ggccagggcc cacggacccg cagctcaggg cgcctgccca
1321 cgtcgtctgc cggcggtgcg ccgcgggcgt ccctcgcgtc tcttcactgc acattgcaat
1381 gcatttgcga ttcccatttc tctgctagga gccagcctgg gtggcgctgc tcccagagcc
1441 gtgggtccca gaccttgcgt tccttttgtt cctgtccgtt tatcaggaca cgggccccac
1501 ctgtcacgtg cccgaggcca cccaagccca gcctgcgggg cgttcccact gcctggatgc
1561 cggcttgagt tctgcgcacg caggattcag tgtggggacg gcccctgccg gataggccta
1621 gccctggccc aggtggtgag cggtttgcag tgtccgttct catccacctg atgggcccag
1681 ataaaggccc ccgctgtcca gcctccctgg acggccctcg cggtccctgc agcccaagat
1741 gggactcaga ccctgtgccc cagagctccc ctgccgcaga atggggcccc agccggcccc
1801 gaccgggtcc aggagcactg ctcgcctgta catactgttg ccctagccca cctggtgccg
1861 tgggagccac ccccaggtgc tgggggcaca gcccctcccc actccggcca cgcccccacc
1921 caccccgcgt gtttctgccc tgtgactcct ggaacctgcg tcctccccaa agccatggga
1981 ggggtgtcct cctcagacca tgcccccaga tgattttttt aaataaagaa acaaatgcac
2041 ctgcaaaaaa aaaaaaaaaa aaaaaa
//