LOCUS BC069026 1812 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens Sp5 transcription factor, mRNA (cDNA clone
IMAGE:6267944), with apparent retained intron.
ACCESSION BC069026
VERSION BC069026.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CGAP (Stanford)
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: j Column: 10
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1812
/db_xref="H-InvDB:HIT000263209"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6267944"
/tissue_type="Liver, hepatocellular carcinoma"
/clone_lib="NIH_MGC_100"
/lab_host="DH10B"
/note="Vector: pOTB7"
BASE COUNT 344 a 625 c 539 g 304 t
ORIGIN
1 agctaacctt ttgtctcttc tccgccctcc ctcgccgcct atgcaggacc gcacccccag
61 cgcctccccg gacctgggca agcactcgcc cctggcattg ctggccgcca cctgtagccg
121 catcggccag ccgggcgcgg cggcgccccc ggacttcctg caggtgccct acgaccccgc
181 gctgggctca ccctccaggc tcttccaccc gtggaccgcc gacatgccgg cgcactcgcc
241 aggcgcactg ccgcccccgc atcccagctt ggggctgacg ccgcagaaga cgcacctgca
301 gccgtccttc ggggctgcgc acgagcttcc ccttacaccc cccgccgacc cctcgtaccc
361 ctacgagttc tcgccggtca agatgctgcc ctcgagcatg gcggctctgc ccgccagctg
421 cgcgcccgcc tacgtgccct acgcggcgca ggccgcgctg ccgccaggct actccaacct
481 gctgcctccg ccgccgccac cgcccccgcc gcccacctgc cgccagttgt cacccaaccc
541 ggcccccgac gacctcccgt ggtggagcat cccgcaggcg ggcgccgggc cgggggcctc
601 cggggttccg ggaagcggcc tctccggcgc ctgtgccggg gccccccacg cgccccgctt
661 ccccgcctct gcggccgctg ctgctgcggc cgccgccgcc ctacaaagag gcctggtgtt
721 gggcccgtcg gactttgcgc agtaccagag ccagatcgcc gcgctgctgc agaccaaggc
781 ccccctggcg gccacggcca ggaggtgccg ccgctgccgc tgtcccaact gccaggcggc
841 gggcggcgcc cccgaggcgg agccggggaa gaagaagcag cacgtgtgcc acgtgccggg
901 ctgcggcaag gtgtacggga agacgtcgca cctgaaggcg cacctgcgct ggcacacggg
961 cgagcgaccc ttcgtgtgca actggctctt ctgcgggaag agcttcacgc gctcggacga
1021 gctgcagcgg cacctgcgga ctcacacggg cgagaagcgc tttgcctgtc ccgagtgcgg
1081 caagcgcttc atgcgcagcg accacctcgc gaagcacgtc aagactcacc agaataagaa
1141 gctcaaagtc gctgaggccg gggttaagcg ggaggacgcg cgggacctgt gagccctccc
1201 ggaggtggac ccccttccca gcacctctgc gagagatccg gggacctgtg ggcagctggc
1261 ggaggggaga ctcagcagac ggaccctctc cgttgcctgc ctcccaaaat ggagccaggc
1321 ttccaacttc cgctgccttc ggacataggg acccagttcc caggagcggg gaggtagggt
1381 tggggctggg gcatttggat tgtaattggg agctctgccg tacgccaggg cggttccaaa
1441 ctctaaaccg ttcccaccgt cagggagacc tacagtttcg ggggaccacc ctggtctggc
1501 cttgtatata ggaaatgctg ctgaactgaa tagaaaggaa cttgggagat ttgaaacagt
1561 gctcgggttt tcgctaggac cggtttgggc tttgtacagg ttatttaata gctttgttaa
1621 agataattat aataattata acattaataa aaatgttgct tttgtcttca gctccatgca
1681 gagctacagc atgatatgtc tctgtaaagt gatcagcagt tgcagcgtga aaataaatac
1741 tttaactcag gggtcactac aggaagaccc cgttgaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aa
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