LOCUS BC069007 810 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GIY-YIG domain containing 2, mRNA (cDNA clone
MGC:78508 IMAGE:4335620), complete cds.
ACCESSION BC069007
VERSION BC069007.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089944.
FEATURES Location/Qualifiers
source 1..810
/db_xref="H-InvDB:HIT000263191_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78508 IMAGE:4335620"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..810
/gene="GIYD2"
/gene_synonym="FLJ23439"
/gene_synonym="MGC2532"
/gene_synonym="MGC5178"
/db_xref="GeneID:79008"
/db_xref="HGNC:HGNC:28748"
CDS 182..667
/gene="GIYD2"
/gene_synonym="FLJ23439"
/gene_synonym="MGC2532"
/gene_synonym="MGC5178"
/codon_start=1
/product="GIY-YIG domain containing 2"
/protein_id="AAH69007.1"
/db_xref="GeneID:79008"
/db_xref="HGNC:HGNC:28748"
/translation="MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQ
HNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICL
AEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLE
T"
BASE COUNT 189 a 241 c 231 g 149 t
ORIGIN
1 cccgcctcca gacaggagag gggcacgtac cggcgctacg gcttcctgca ggctgcctcc
61 ggatagtccc cgagagcttg ttccgaagca agcaccctgc agccctagcg atccagccct
121 cccctggacc ctaggtcacg gcaatcaacc ccctgctgtg gttcccgaac cccaaggccc
181 gatgggtccc gcgggggtcg cggcgaggcc agggcgcttt ttcggcgtct acctgctcta
241 ctgcctgaac ccccggtacc ggggccgcgt ctacgtgggg ttcactgtca acactgctcg
301 tcgggtccag cagcacaatg ggggccgcaa aaaaggcggg gcctggcgga ccagcgggcg
361 agggccctgg gagatggtgc tcgtcgtgca cggcttcccg tcctccgtgg ccgcccttcg
421 ggatgaagag gggcccttgt gttgccccca ccctggctgc ctgctaaggg cccatgtgat
481 ctgcctggca gaggagtttc ttcaggaaga accagggcag cttctgcccc tagagggcca
541 atgcccttgc tgtgagaagt cactgctttg gggagacctg atctggctgt gccagatgga
601 cactgagaaa gaagtagaag actcagaatt agaagaggca cactggacag acctgctgga
661 gacctgatcc tcagtgtcct taccccctcc tacctctttt ctgtgccacc tgctgtgggt
721 ccagcaggtt tttacttgag tacaataaaa agtctgagtc aaaaaaaaaa aaaaaaaaaa
781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//