LOCUS BC068590 2539 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens chondroadherin-like, mRNA (cDNA clone IMAGE:4819656),
partial cds.
ACCESSION BC068590
VERSION BC068590.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2539)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2539)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2539
/db_xref="H-InvDB:HIT000263145"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4819656"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2539
/gene="CHADL"
/gene_synonym="SLRR4B"
/db_xref="GeneID:150356"
/db_xref="HGNC:HGNC:25165"
CDS <1..2339
/gene="CHADL"
/gene_synonym="SLRR4B"
/codon_start=3
/product="CHADL protein"
/protein_id="AAH68590.1"
/db_xref="GeneID:150356"
/db_xref="HGNC:HGNC:25165"
/translation="PVPALRLQAGPAVPGGMEGPRSSTHVPLVLPLLVLLLLAPARQA
AAQRCPQACICDNSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQGVP
HLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGN
ALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEAL
AGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELL
LDGGALQALGPRAFAHCPRLHTLDLRGNQLDTLPPLQGPGQLRRLRLQGNPLWCGCQA
RPLLEWLARARVRSDGACQGPRRLRGEALDALRPWDLRCPGDAAQEEEELEERAVAGP
RAPPRGPPRGPGEERAVAPCPRACVCVPESRHSSCEGCGLQAVPRGFRSDTQLLDLRR
NHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAA
LEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLHDNAVDRLAPGDLGRTRALRWV
YLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRAL
RDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPALPSLSQ
LELIDLSSNPFHCDCQLLPLHRWLTGLNLRVGATCATPPNARGQRVKAAAAVFEDCPG
WAARKAKRTPASRPSARRTPIKGRQCGADKVGKEKGRL"
BASE COUNT 369 a 908 c 854 g 408 t
ORIGIN
1 agcctgtccc tgcgctgcgc ctccaggctg gaccagcagt tccaggcggc atggaggggc
61 cccggagctc cacccatgtc cccttggtgc tgccgcttct tgtacttctg ctgctggccc
121 cggctaggca ggccgccgcc cagcgctgcc cacaggcctg catctgtgac aactccaggc
181 gacacgttgc ctgccggtac cagaacctca ctgaggtgcc agacgccatc cctgagctga
241 cccagcggct ggacctgcag ggcaatttgc tgaaggtgat ccccgcagcc gccttccagg
301 gcgtgcctca cctcacacac ctggacctgc gccactgcga ggtggagctg gtggccgagg
361 gcgccttccg tggcctgggc cgcctgctcc tgctcaacct ggcctccaac cacctgcgtg
421 agctgcccca ggaggcgctg gacgggctgg gctcgttgcg gcggctggag ctggagggga
481 acgcactgga ggagctgcgg ccggggacgt tcggggcact gggtgcgctg gccacgctaa
541 acctggccca caacgccctg gtttacctgc ccgccatggc cttccagggg ctactgcgcg
601 tccgctggct gcggctgtcg cacaacgcgc tcagcgtgct ggcccccgag gccctggctg
661 gcctgcccgc cctgagacgg ctcagcctac accacaacga gctccaggct ctgcccgggc
721 ctgtcttgtc ccaggcccgc ggcctggccc gtctggagct gggccacaac ccgctcacct
781 acgcgggcga ggaggacggg ctggcgctgc ccggcctgcg ggagctgctg ctggacggcg
841 gggccctgca ggccctgggt cccagggcct tcgcacactg tccgcgcctg cacaccctcg
901 acctccgcgg gaaccagcta gacaccctgc ccccgctgca gggcccgggc cagctgcgcc
961 ggctgcggct gcaggggaat ccgctgtggt gcggctgcca ggcgcggccc ctactcgagt
1021 ggctggcgcg ggcgcgcgtg cgctcggacg gcgcgtgcca ggggccgcgg cgcctgcggg
1081 gcgaggctct ggacgccctg cggccctggg acctgcgctg ccctggggac gcggcgcagg
1141 aagaggaaga gctggaagag cgggctgtgg ccgggccccg cgcccctccg cgcggccctc
1201 cgcgcggccc cggggaggag cgggcagtcg cgccttgccc tcgcgcctgc gtgtgcgtcc
1261 ccgagtcccg gcacagcagc tgcgagggct gcggcctgca ggcggtgccc cgcggcttcc
1321 gcagcgacac ccagctcctg gacctgaggc ggaaccactt cccctcggtg ccccgagcgg
1381 ccttccccgg cctgggccac ctggtgtcgc tgcacctgca gcactgcggc atcgcggagc
1441 tggaagcggg cgccctggcc gggctgggcc gcctgatcta cctgtacctc tccgacaacc
1501 agctcgcagg cctcagcgct gctgcccttg aaggggctcc ccgcctcggc tacctgtacc
1561 tagaacgcaa ccgtttcctg caggtgccag gggctgccct gcgcgccctg cccagcctct
1621 tctccctgca cctgcatgac aacgctgtgg accgcctggc acctggggac ctggggagaa
1681 cacgggcctt gcgctgggtc tacctgagtg gaaaccgcat caccgaagtg tcccttgggg
1741 cgctgggccc agctcgggag ctggagaagc tgcacctgga caggaatcag ctgcgagagg
1801 tgcccactgg ggccttggag gggctgcctg ccctcctgga gctgcagctc tcgggcaacc
1861 cactcagggc cttgcgtgac ggagccttcc agcctgtggg caggtcgctg cagcacctct
1921 tcctgaacag cagtggcctg gagcagattt gtcctggggc cttttcaggc ctggggcccg
1981 ggctccagag cctgcacctg cagaagaacc agcttcgggc cctgcctgcc ctgcccagtc
2041 tcagccagct ggagctcatc gacctcagca gcaatccctt ccactgtgac tgccagctgc
2101 ttccgctgca caggtggctt actgggctga acctgcgggt gggggccacc tgcgccaccc
2161 ctcccaatgc ccgtggccag agggtgaagg ctgcagctgc tgtctttgaa gactgcccgg
2221 gctgggctgc cagaaaggcc aagcggacac cagcctccag gcccagtgcc aggagaaccc
2281 ccatcaaagg aagacagtgt ggagcagata aggtggggaa ggagaagggt cgtctctgag
2341 cacggagcag gctggtcctg ccttgaccca gcccggtggc tcttactctc gccaggaaca
2401 ggctccgacg agatcttcct ggcaccctga gggtcgtcct ccagcagggg cttcttggac
2461 ccctgtctga ggggtcgcgt cttagtgggc gggattcttt tccctttgaa taaaaatgga
2521 ttcaaaaaaa aaaaaaaaa
//