LOCUS BC068589 3195 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens sorting nexin 14, mRNA (cDNA clone MGC:87608
IMAGE:4818366), complete cds.
ACCESSION BC068589
VERSION BC068589.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3195)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3195)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39777616.
FEATURES Location/Qualifiers
source 1..3195
/db_xref="H-InvDB:HIT000263144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87608 IMAGE:4818366"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3195
/gene="SNX14"
/gene_synonym="MGC13217"
/gene_synonym="RGS-PX2"
/gene_synonym="RP11-321N4.2"
/db_xref="GeneID:57231"
/db_xref="HGNC:HGNC:14977"
CDS 178..3018
/gene="SNX14"
/gene_synonym="MGC13217"
/gene_synonym="RGS-PX2"
/gene_synonym="RP11-321N4.2"
/codon_start=1
/product="sorting nexin 14"
/protein_id="AAH68589.1"
/db_xref="GeneID:57231"
/db_xref="HGNC:HGNC:14977"
/translation="MVPWVRTMGQKLKQRLRLDVGREICRQYPLFCFLLLCLSAASLL
LNRYIHILMIFWSFVVGVVTFYCSLGPDSLLPNIFFTIKYKPKQLGLQELFPQGHSCA
VCGKVKCKRHRPSLLLENYQPWLDLKISSKVDASLSEVLELVLENFVYPWYRDVTDDE
SFVDELRITLRFFASVLIRRIHKVDIPSIITKKLLKAAMKHIEVIVKARQKVKNTEFL
QQAALEEYGPELHVALRSRRDELHYLRKLTELLFPYILPPKATDCRSLTLLIREILSG
SVFLPSLDFLADPDTVNHLLIIFIDDSPPEKATEPASPLVRFLQKFAEPRNKKPSVLK
LELKQIREQQDLLFRFMNFLKQEGAVHVLQFCLTVEEFNDRILRPELSNDEMLSLHEE
LQKIYKTYCLDESIDKIRFDPFIVEEIQRIAEGPYIDVVKLQTMRCLFEAYEHVLSLL
ENVFTPMFCHSDEYFRQLLRGAESPTRNSKLNRGSLSLDDFRNTQKRGESFGISRIGS
KIKGVFKSTTMEGAMLPNYGVAEGEDDFIEEGIVVMEDDSPVEAVSTPNTPRNLAAWK
ISIPYVDFFEDPSSERKEKKERIPVFCIDVERNDRRAVGHEPEHWSVYRRYLEFYVLE
SKLTEFHGAFPDAQLPSKRIIGPKNYEFLKSKREEFQEYLQKLLQHPELSNSQLLADF
LSPNGGETQFLDKILPDVNLGKIIKSVPGKLMKEKGQHLEPFIMNFINSCESPKPKPS
RPELTILSPTSENNKKLFNDLFKNNANRAENTERKQNQNYFMEVMTVEGVYDYLMYVG
RVVFQVPDWLHHLLMGTRILFKNTLEMYTDYYLQCKLEQLFQEHRLVSLITLLRDAIF
CENTEPRSLQDKQKGAKQTFEEMMNYIPDLLVKCIGEETKYESIRLLFDGLQQPVLNK
QLTYVLLDIVIQELFPELNKVQKEVTSVTSWM"
BASE COUNT 984 a 583 c 688 g 940 t
ORIGIN
1 ggcggggggc gtggggctgg gcccagccgg acgcgacctc agcctgcggc ggctaactgc
61 cggtaggcgt ctgtgtgcgc cgccaagtcg gtggggcggg gacgcgaggt gtggatgggg
121 ggtcgcattg acctctgcct cagccagtag cgcagtctcg gcctcgccgt tacggagatg
181 gtgccctggg tgcggacgat ggggcagaag ctgaagcagc ggctgcgact ggacgtggga
241 cgcgagatct gccgccagta cccgctgttc tgcttcctgc tgctctgtct cagcgccgcc
301 tccctgcttc ttaacaggta tattcatatt ttaatgatct tctggtcatt tgttgttgga
361 gttgtcacat tctactgctc actaggacct gattctctct taccaaatat attcttcaca
421 ataaaataca aacccaagca gttaggactt caggaattat ttcctcaagg tcatagctgt
481 gctgtttgtg gtaaagtgaa atgtaaacga cataggcctt ctttgctact tgaaaactac
541 cagccatggc tagacctgaa aatttcttcc aaggttgatg catctctctc agaggttctt
601 gaattagtgt tggaaaactt tgtttatccg tggtacaggg atgtgacaga tgatgaatcc
661 tttgttgatg aactgagaat aacattacgt ttttttgcat ctgtcttaat aagaaggatt
721 cacaaggtgg atattccatc tattataacc aagaaactat taaaagcagc aatgaagcat
781 atagaagtga tagttaaagc cagacagaaa gtaaaaaata cagagttttt acagcaagct
841 gctttagaag aatatggtcc agagcttcat gttgctttga gaagtcgaag agatgaattg
901 cactatttaa ggaaacttac tgaactgctt tttccttata ttttgcctcc taaagcaaca
961 gactgcagat ctctgacctt acttataaga gagattctgt ctggctctgt gttccttcct
1021 tctttggatt tcctagctga tccagatact gtgaatcatt tgcttatcat cttcatagat
1081 gacagtccac ctgaaaaagc aactgaaccg gcttctcctt tggttcgatt cttgcagaaa
1141 tttgcagaac ctagaaataa aaagccatct gtgctgaagt tagaattgaa gcaaatcaga
1201 gagcaacaag atcttttatt tcgttttatg aacttcctga aacaagaagg cgcagtgcac
1261 gtgttgcagt tttgtttgac tgtggaggaa tttaatgata gaattttacg accagaatta
1321 tcaaatgatg aaatgctgtc tcttcatgaa gaattgcaga agatttataa aacatactgt
1381 ttggatgaaa gtattgacaa aattagattt gatcccttca ttgtagaaga gattcaaaga
1441 attgctgagg gcccatacat agatgttgtg aaacttcaaa ctatgagatg tctttttgaa
1501 gcatatgaac atgttctttc ccttttggag aatgtattta ctcctatgtt ctgccatagt
1561 gatgagtatt tcagacaact tttaagaggt gcagaatcac caacacgcaa ttcaaaattg
1621 aacagaggta gcctaagttt ggatgatttt cggaacacac agaaaagggg agaatcattt
1681 ggaatcagca gaataggtag caaaattaaa ggagtattca aaagtaccac aatggaggga
1741 gctatgttgc ctaattatgg tgtagctgaa ggtgaagatg attttattga agaaggtatt
1801 gttgtaatgg aagatgattc tccagtggag gctgtgagca cacctaatac tccccgaaac
1861 cttgctgcat ggaaaattag cattccatat gtagactttt ttgaggatcc ctcctctgaa
1921 aggaaggaga aaaaagaaag aattcctgtg ttttgtattg atgttgaaag aaatgataga
1981 agagcagttg gacacgagcc tgaacattgg tctgtctata gaagatatct tgaattctat
2041 gtacttgaat caaaactaac agaatttcat ggtgcatttc ctgatgccca gcttccttct
2101 aagaggatca ttggccccaa aaattatgaa ttcttaaagt caaagaggga agagttccaa
2161 gaatatctac agaaacttct gcagcatcca gaactgagta atagtcaact tctggcagac
2221 tttctttccc ctaatggtgg ggaaacacaa tttcttgata agatactacc agatgtaaat
2281 cttgggaaaa ttataaaatc tgttcctgga aaactaatga aagagaaagg tcagcatttg
2341 gaacctttta tcatgaattt cattaattct tgtgagtctc caaagcctaa accaagtaga
2401 ccagaactga ccattctcag ccctacttca gaaaacaaca agaagctttt caatgatctg
2461 tttaaaaata atgcaaaccg tgctgaaaat acagagagaa agcaaaatca gaattatttt
2521 atggaggtga tgactgtaga aggagtctat gattacctga tgtatgtagg acgggtagtt
2581 ttccaggttc ctgactggct tcatcatctc ttaatgggaa ctcgaatcct ctttaaaaac
2641 accttggaaa tgtatactga ttactatctt cagtgtaaac tagaacagct atttcaggag
2701 caccgtttgg tctcactcat aacacttctc agagatgcta tattctgtga aaacactgaa
2761 cctcgctctc tccaagataa gcaaaaagga gcaaaacaga cttttgaaga aatgatgaat
2821 tacattccag atctgttagt caagtgtatt ggtgaagaaa ccaagtatga aagcatcaga
2881 cttctgtttg atggcttaca gcaaccagta ctcaacaagc agctgactta tgttttattg
2941 gacattgtga tacaggaact gtttccagag ctcaataagg tacaaaagga agttacctct
3001 gtgacatctt ggatgtaaac acttggattt ggtatagaat aacccattga aatttctgct
3061 gtgcgagggt ggtagaaatt tacttttttg ggtatattct tatatatatt atgtacatcg
3121 ctgtctgaaa ttttagttat tttttgtttt taataaagac taacacaaac ttaatgatca
3181 aaaaaaaaaa aaaaa
//