LOCUS BC068556 3186 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens solute carrier family 46, member 3, mRNA (cDNA clone
MGC:87475 IMAGE:4820792), complete cds.
ACCESSION BC068556
VERSION BC068556.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32401446.
FEATURES Location/Qualifiers
source 1..3186
/db_xref="H-InvDB:HIT000263113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87475 IMAGE:4820792"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3186
/gene="SLC46A3"
/gene_synonym="FKSG16"
/db_xref="GeneID:283537"
/db_xref="HGNC:HGNC:27501"
CDS 371..1756
/gene="SLC46A3"
/gene_synonym="FKSG16"
/codon_start=1
/product="solute carrier family 46, member 3"
/protein_id="AAH68556.1"
/db_xref="GeneID:283537"
/db_xref="HGNC:HGNC:27501"
/translation="MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSD
SNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKF
PMILSSIGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCK
EHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFL
GDPVKECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIG
IAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFT
TMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLE
TLGGVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYELLI
QEESSEDASDR"
BASE COUNT 853 a 680 c 625 g 1028 t
ORIGIN
1 gcgccgcgct gaggccgagg tccgcagggc cgcggggaag ccgagggctg ccggagaacc
61 ctgcaggtgt cactcgggac gcggaagtgc gcttgccgag gtttgcctta caatacgctt
121 gagactcccc gacaagcgta atttggtcga gttcgacggg aaagtactct ccccacccca
181 gcgccggccg cgtagtccga ggttactgtc cccggcgcgt cctctgttgc cccagtccag
241 aggctgccct tgaacccggg cgcgcacgag cgcagggcat ccgaggcgac agcccctggc
301 acggcccgac ctgtacccag cctggcagga agactgtaat cgtgggaata cagctaccta
361 cccaggcaat atgaagattt tatttgtaga acctgccatt ttccttagtg catttgctat
421 gactttgacc ggtccactga caacgcaata tgtttatcgg agaatatggg aagaaactgg
481 caactacact ttttcatctg atagcaatat ttctgagtgt gaaaaaaaca aaagcagccc
541 aatttttgca ttccaggagg aagttcagaa aaaagtgtca cgttttaatc tgcagatgga
601 cataagtgga ttaattcctg gtctagtgtc tacattcata cttttgtcta ttagtgatca
661 ctacggacga aaattcccta tgattttgtc ttccattggt gctcttgcaa ccagcgtttg
721 gctctgtttg ctttgctatt ttgcctttcc attccagctt ttgattgcat ctaccttcat
781 tggtgcattt tgtggcaatt ataccacatt ttggggagct tgctttgcct atatagttga
841 tcagtgtaaa gaacacaaac aaaaaacaat tcgaatagct atcattgact ttctacttgg
901 acttgttact ggactaacag gactgtcatc tggctatttt attagagagc taggttttga
961 gtggtcgttt ctaattattg ctgtgtctct tgctgttaat ttgatctata ttttattttt
1021 tctcggagat ccagtgaaag agtgttcatc tcagaatgtt actatgtcat gtagtgaagg
1081 cttcaaaaac ctattttacc gaacttacat gctttttaag aatgcttctg gtaagagacg
1141 atttttgctc tgtttgttac tttttacagt aatcacttat ttttttgtgg taattggcat
1201 tgccccaatt tttatccttt atgaattgga ttcaccactc tgctggaatg aagtttttat
1261 aggttatgga tcagctttgg gtagtgcctc ttttttgact agtttcctag gaatatggct
1321 tttttcttat tgtatggaag atattcatat ggccttcatt gggattttta ccacgatgac
1381 aggaatggct atgaccgcgt ttgccagtac aacactgatg atgtttttag ccagggtgcc
1441 gttccttttc actattgtgc cattctctgt tctacggtcc atgttgtcaa aagtggttcg
1501 ttcgactgaa caaggtaccc tgtttgcttg tattgctttc ttagaaacac ttggaggagt
1561 cactgcagtt tctactttta atggaattta ctcagccact gttgcttggt accctggctt
1621 cactttcctg ctgtctgctg gtctgttact acttccagcc atcagtctat gtgttgtcaa
1681 gtgtaccagt tggaatgagg gaagctatga acttcttata caagaagaat ccagtgaaga
1741 tgcttcagac aggtgactgt gatttaaaca aacaaaaaaa atctatgaat gcacatatca
1801 tataccatga cttctgaaga ctataaatga attccacaat cagtgcttca ctgagaacca
1861 attttaccta tcttttcttc taaactgaac agtcagagag acagctcctg gctttagctt
1921 cttgtggtac cacgcacttt gagcactttg tgcgtatcat gcaatatact tgcaatacac
1981 agaacaaatt tcaaatacgc ctcactttta gacttagaag agaaacatta aaacttaagg
2041 gtgtaaggag ggatcaagaa acttgataag gtcaaaagca ataatctctc tgacatattc
2101 caggctctta cactgagacc aaagagaaat ctttacctca gtttcttcat cagcagaatg
2161 ggtttctggc ctctctcagg gataattttg aaggcataat gaaaattatg atgaatcact
2221 cattggtagg aaaataatga tataagtttc aaatatgtat aattttacct atacttggta
2281 atgctttgtt ttatagagcc tgttaagctg ctattgatag tcggagctta tatactgtga
2341 cttctgaaga ctatacatga attccacaat cagtgctttg ttgatacaaa atccttaaaa
2401 gggaggcact ttaaagaata tgtatttttc acttttctta atatgtttca tcggtgacag
2461 gcatgataat atttctatat gtaatgggta attgggaaaa aatagatgat aaataaaatt
2521 gctctaaaga agttaaaaaa ctgaatgaac agctaatact ggtataaagt aactaatgtt
2581 tggagccaac atttgttcct tgtgtcagca aaaggatatt cacattccat gatccctggc
2641 tgagaattct gcctctagtc tttcttacgc agctgttgtc tatccttgtt caattataaa
2701 tactgctaag ggcattttta aaatacgatc ttgtactcct taaatttgaa tccgtcggca
2761 cggtcactca taggaaaatg atcaaacaag caagccagtc atgatttgac tccttcccat
2821 ctcatttctt actgccttac gctcatcctg aggtccacct tggtctctaa aaacaccatg
2881 tgttctcatg cctccatgtc ttttcacaca ctgttccatt tgctcttcct cccacattac
2941 attgaaactt tcaagcctca gtcgaaacat tgcttcttct ggatagcagc cttcttgaca
3001 tccctcctca ctccccagtc cctacagggc ttccatagct ctttatgtgc acttcgatcc
3061 cagcattttc catcgacttg taattgtttc tgctacctga caatcatcgc cttgagtact
3121 gggacaacct ttgattactc attatatcct caataaatat ttgttgaacc aaaaaaaaaa
3181 aaaaaa
//